RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 EPHB6O15197 1021 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TYROBPO43914 113 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TLR2O60603 784 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 JRKO75564 520 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CRTAMO95727 393 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ALDH1A1P00352 501 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GH1P01241 217 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SPATA31D3P0C874 917 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYCLP1P12525 358 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ACTN1P12814 892 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAG1P15918 1043 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TNFAIP3P21580 790 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 FUT4P22083 530 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRKACBP22694 351 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 IL12AP29459 219 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 NMT1P30419 496 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PKLRP30613 574 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CIITAP33076 1130 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RFC1P35251 1148 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAGEA4P43358 317 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 IREB2P48200 963 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC5A3P53794 718 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GALCP54803 685 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMBIM6P55061 237 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 WDR4P57081 412 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RHBDL3P58872 404 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GPC5P78333 572 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TXNL4AP83876 142 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ECT2LQ008S8 904 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MECOMQ03112 1051 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ARID5AQ03989 594 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPATQ06203 517 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAD51Q06609 339 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GALNT1Q10472 559 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SF3A3Q12874 501 aaKnown RBP eCLIP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRAP1Q12931 704 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 DLG1Q12959 904 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 COL19A1Q14993 1142 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MORF4L2Q15014 288 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CERKLQ49MI3 558 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 FAM26FQ5R3K3 315 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 C6orf183Q5T699 404 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 EGFLAMQ63HQ2 1017 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SYCE2Q6PIF2 218 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RHBDF2Q6PJF5 856 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 DCLRE1AQ6PJP8 1040 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SPATA31D4Q6ZUB0 917 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF571Q7Z3V5 609 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 HEATR3Q7Z4Q2 680 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 IRF2BP2Q7Z5L9 587 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC51BQ86UW2 128 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GPBP1Q86WP2 473 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ANKMY2Q8IV38 441 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC28AQ8IWP9 274 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZC3H3Q8IXZ2 948 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC7A5P1Q8MH63 180 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 LZTR1Q8N653 840 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 VGLL2Q8N8G2 317 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRELID2Q8N945 189 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RNF169Q8NCN4 708 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 VPS37AQ8NEZ2 397 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLBD2Q8NHP8 589 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RFWD2Q8NHY2 731 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPP4R1Q8TF05 950 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAB2BQ8WUD1 216 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAML1Q92585 1016 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 GLG1Q92896 1179 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ISOC1Q96CN7 298 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 APOPT1Q96IL0 206 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CNBD2Q96M20 576 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RBM15Q96T37 977 aaKnown RBP eCLIP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 DOK1Q99704 481 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 DHRS9Q9BPW9 319 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 TRIM56Q9BRZ2 755 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 KIFC3Q9BVG8 833 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 FRMD8Q9BZ67 464 aaPredicted RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CDH19Q9H159 772 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SEMA6BQ9H3T3 888 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 RUBCNLQ9H714 662 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SP140LQ9H930 580 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MARCH7Q9H992 704 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MKNK2Q9HBH9 465 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 ATP13A2Q9NQ11 1180 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PARVAQ9NVD7 372 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 COPG2Q9UBF2 871 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPARGC1AQ9UBK2 798 aaKnown RBP5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 DCTN4Q9UJW0 460 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLA2G4CQ9UP65 541 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 SHOC2Q9UQ13 582 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYH4Q9Y623 1939 aa5.82□□□□□ -1.48
VTI1BP4-201ENST00000427516 CCDC88AQ3V6T2 1871 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLUHO75153 1309 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 A0A1B0GUL6 1792 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ANKRD36CQ5JPF3 1778 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CAPN14A8MX76 684 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLDN25C9JDP6 229 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 FSCN2O14926 492 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ACOX3O15254 700 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAGEB3O15480 346 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms