RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SPATA20Q8TB22 786 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 CD101Q93033 1021 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 CHFRQ96EP1 664 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 HNRNPABQ99729 332 aaKnown RBP10.78□□□□□ -0.68
COMMD1-202ENST00000427417 RNF38Q9H0F5 515 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 CSNK1G1Q9HCP0 422 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 SMG5Q9UPR3 1016 aaKnown RBP10.78□□□□□ -0.68
COMMD1-202ENST00000427417 DCHS1Q96JQ0 3298 aa10.78□□□□□ -0.68
COMMD1-202ENST00000427417 FAM92AA1XBS5 289 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 PSMA7O14818 248 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 CCDC130P13994 396 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 CD58P19256 250 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 HOXA6P31267 233 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 GALK1P51570 392 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 MAP3K7CLP57077 242 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 SRSF5Q13243 272 aaKnown RBP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 ORC1Q13415 861 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 TCERG1LQ5VWI1 586 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 FSTL4Q6MZW2 842 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 PKN3Q6P5Z2 889 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 C12orf29Q8N999 325 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 SCAMP5Q8TAC9 235 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 CYFIP2Q96F07 1278 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 NACA2Q9H009 215 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 APOBEC3GQ9HC16 384 aaKnown RBP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 PNPLA8Q9NP80 782 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 TLR8Q9NR97 1041 aaKnown RBP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 FAM49BQ9NUQ9 324 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 POLR3BQ9NW08 1133 aaPredicted RBP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 RAB20Q9NX57 234 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 IL37Q9NZH6 218 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 TBC1D14Q9P2M4 693 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 HMGXB4Q9UGU5 601 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 CHORDC1Q9UHD1 332 aaPredicted RBP10.77□□□□□ -0.69
COMMD1-202ENST00000427417 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 SLC8A2Q9UPR5 921 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 PCDHA5Q9Y5H7 936 aa10.77□□□□□ -0.69
COMMD1-202ENST00000427417 CCDC163A0A0D9SF12 145 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 CHURC1-FNTBB4DL54 471 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 K7ESF4 209 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 COCHO43405 550 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 RNF40O75150 1001 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 CILPO75339 1184 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ADH1CP00326 375 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 EGFP01133 1207 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ZDHHC11BP0C7U3 371 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ADORA2BP29275 332 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ID4P47928 161 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 FNTBP49356 437 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ZXDBP98169 803 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 GOLGA8FQ08AF8 430 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 GOLGA8DPQ0D2H9 430 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 DCAF17Q5H9S7 520 aaPredicted RBP10.76□□□□□ -0.69
COMMD1-202ENST00000427417 HEATR6Q6AI08 1181 aaKnown RBP10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ANKRD40Q6AI12 368 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 FILIP1Q7Z7B0 1213 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ZMIZ2Q8NF64 920 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 ACDQ96AP0 544 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 RMDN1Q96DB5 314 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 OTUB2Q96DC9 234 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 EEF2KMTQ96G04 330 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
COMMD1-202ENST00000427417 SMOQ99835 787 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 LINC00597Q9H2U6 94 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 METTL14Q9HCE5 456 aaKnown RBP10.76□□□□□ -0.69
COMMD1-202ENST00000427417 CFAP97Q9P2B7 532 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
COMMD1-202ENST00000427417 SH3BP1Q9Y3L3 701 aa10.76□□□□□ -0.69
COMMD1-202ENST00000427417 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 TLR5O60602 858 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 BEST1O76090 585 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 SLC8A3P57103 927 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 YWHAEP62258 255 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 SIM2Q14190 667 aaPredicted RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 PREPLQ4J6C6 727 aaPredicted RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 LAIR1Q6GTX8 287 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 PRR23BQ6ZRT6 265 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 CLEC20AQ6ZU45 233 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 WDR5BQ86VZ2 330 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 ZC3H3Q8IXZ2 948 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 ADGRG2Q8IZP9 1017 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 CAMKK1Q8N5S9 505 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 TMEM176AQ96HP8 235 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 HEXIM2Q96MH2 286 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 CEP63Q96MT8 703 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 TWNKQ96RR1 684 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 DUSP9Q99956 384 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 FBRSL1Q9HCM7 1045 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 CISHQ9NSE2 258 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 GMIPQ9P107 970 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 ARMCX3Q9UH62 379 aaPredicted RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 SCML2Q9UQR0 700 aa10.75□□□□□ -0.69
COMMD1-202ENST00000427417 HELZP42694 1942 aaKnown RBP10.75□□□□□ -0.69
COMMD1-202ENST00000427417 SDK1Q7Z5N4 2213 aa10.74□□□□□ -0.69
COMMD1-202ENST00000427417 CEP250Q9BV73 2442 aa10.74□□□□□ -0.69
COMMD1-202ENST00000427417 BICDL2A1A5D9 508 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms