RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 C11orf63Q6NUN7 778 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 CPNE8Q86YQ8 564 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 SYCE1Q8N0S2 351 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 KHSRPQ92945 711 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCRN1-205ENST00000425819 FAM149B1Q96BN6 582 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 CYP4F11Q9HBI6 524 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 CNGB3Q9NQW8 809 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 TMEM59LQ9UK28 342 aa16.57■□□□□ 0.24
SCRN1-205ENST00000425819 PACSIN2Q9UNF0 486 aaPredicted RBP16.57■□□□□ 0.24
SCRN1-205ENST00000425819 GBF1Q92538 1859 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 C2orf71A6NGG8 1288 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 HIDE1A8MVS5 230 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 TNFRSF10BO14763 440 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 ZBED1O96006 694 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 ATP1A1P05023 1023 aaKnown RBP16.56■□□□□ 0.24
SCRN1-205ENST00000425819 COMTP21964 271 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 IRS1P35568 1242 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 RGS19P49795 217 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 DAOAP59103 153 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 RPL10AP62906 217 aaKnown RBP16.56■□□□□ 0.24
SCRN1-205ENST00000425819 ZNF252P-AS1Q0IIN9 211 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 EFHC1Q5JVL4 640 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 TRNP1Q6NT89 227 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 SLC26A9Q7LBE3 791 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
SCRN1-205ENST00000425819 GIPC2Q8TF65 315 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 KLHL5Q96PQ7 755 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 NAPGQ99747 312 aaPredicted RBP16.56■□□□□ 0.24
SCRN1-205ENST00000425819 IP6K2Q9UHH9 426 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 JRKLQ9Y4A0 524 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 ALG6Q9Y672 507 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 PTPRDP23468 1912 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 CEP290O15078 2479 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 MYH10P35580 1976 aa16.56■□□□□ 0.24
SCRN1-205ENST00000425819 H3BNC9 293 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 LPXNO60711 386 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 PROSCO94903 275 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SPATA31D3P0C874 917 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 ATF6P18850 670 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 PSMA2P25787 234 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 KLRC2P26717 231 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 ELF1P32519 619 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 FLT3P36888 993 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SCNN1AP37088 669 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 TUFMP49411 452 aaKnown RBP16.55■□□□□ 0.24
SCRN1-205ENST00000425819 DNA2P51530 1060 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 CAMK1Q14012 370 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 CHRDL2Q6WN34 429 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SPATA31D4Q6ZUB0 917 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 HFE2Q6ZVN8 426 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 NT5DC3Q86UY8 548 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 KIF18AQ8NI77 898 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 RXFP2Q8WXD0 754 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 ARNTL2Q8WYA1 636 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 EMILIN2Q9BXX0 1053 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SLC28A3Q9HAS3 691 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 AMFRQ9UKV5 643 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 USTQ9Y2C2 406 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 IRAK3Q9Y616 596 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 USP3Q9Y6I4 520 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 C2CD4BA6NLJ0 364 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 YJEFN3A6XGL0 299 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 E7ENQ6 273 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 PRRG1O14668 218 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 FSCN2O14926 492 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SPOPO43791 374 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 ADH1AP07327 375 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 PDGFRAP16234 1089 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 GPD1P21695 349 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 USP46P62068 366 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 MEI1Q5TIA1 1274 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 NGRNQ9NPE2 291 aaKnown RBP16.55■□□□□ 0.24
SCRN1-205ENST00000425819 YIPF1Q9Y548 306 aa16.55■□□□□ 0.24
SCRN1-205ENST00000425819 SART1O43290 800 aaKnown RBP16.54■□□□□ 0.24
SCRN1-205ENST00000425819 TGM5O43548 720 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 HSF2BPO75031 334 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 YWHAZP63104 245 aaKnown RBP16.54■□□□□ 0.24
SCRN1-205ENST00000425819 MTMR3Q13615 1198 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 PM20D1Q6GTS8 502 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 DENND5BQ6ZUT9 1274 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 BHLHA9Q7RTU4 235 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 FNIP1Q8TF40 1166 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 TLR10Q9BXR5 811 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 HSFX1Q9UBD0 423 aa16.54■□□□□ 0.24
SCRN1-205ENST00000425819 SLC38A8A6NNN8 435 aa16.53■□□□□ 0.24
SCRN1-205ENST00000425819 DAB1O75553 588 aa16.53■□□□□ 0.24
SCRN1-205ENST00000425819 SLC1A1P43005 524 aa16.53■□□□□ 0.24
SCRN1-205ENST00000425819 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
SCRN1-205ENST00000425819 ALDH1A3P47895 512 aa16.53■□□□□ 0.24
SCRN1-205ENST00000425819 ZNF143P52747 638 aaPredicted RBP16.53■□□□□ 0.24
SCRN1-205ENST00000425819 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
SCRN1-205ENST00000425819 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
SCRN1-205ENST00000425819 TCEAL8Q8IYN2 117 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms