RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 CETN1Q12798 172 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 ANGPT1Q15389 498 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 C1orf228Q6PIY5 440 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 RBM43Q6ZSC3 357 aaKnown RBP18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 KIAA1958Q8N8K9 716 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 OSCP1Q8WVF1 389 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 KAT5Q92993 513 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 CNOT6LQ96LI5 555 aaKnown RBP18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 UBXN6Q9BZV1 441 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 EBF3Q9H4W6 596 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 GMIPQ9P107 970 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 USP3Q9Y6I4 520 aa18.92■□□□□ 0.62
IGHV3-47-201ENST00000425060 LEFTY2O00292 366 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 COCHO43405 550 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 CHRNB1P11230 501 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 ARSAP15289 507 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 TUBP50607 506 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 GCNT1Q02742 428 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 PDGFRLQ15198 375 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 EML3Q32P44 896 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 CC2D1AQ6P1N0 951 aaPredicted RBP18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 C1orf210Q8IVY1 113 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 ARHGEF19Q8IW93 802 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 MAML2Q8IZL2 1156 aaPredicted RBP18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 ZFRQ96KR1 1074 aaKnown RBP18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 NDRG2Q9UN36 371 aaKnown RBP18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 SCML2Q9UQR0 700 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 CPQQ9Y646 472 aa18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 HELZP42694 1942 aaKnown RBP18.91■□□□□ 0.62
IGHV3-47-201ENST00000425060 CACNA1IQ9P0X4 2223 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 HECTD3Q5T447 861 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 TTC30AQ86WT1 665 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 PPM1KQ8N3J5 372 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 ATOH1Q92858 354 aaPredicted RBP18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 LINC00597Q9H2U6 94 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 CCSER2Q9H7U1 834 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 LMAN1LQ9HAT1 526 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 DUS2Q9NX74 493 aaKnown RBP18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 KIAA1257Q9ULG3 409 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 WNT6Q9Y6F9 365 aa18.9■□□□□ 0.62
IGHV3-47-201ENST00000425060 VDRP11473 427 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 CT47A1Q5JQC4 288 aaPredicted RBP18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 TMEM270Q6UE05 265 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 MAMSTRQ6ZN01 415 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 RRAGAQ7L523 313 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 KREMEN1Q96MU8 473 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 INTS2Q9H0H0 1204 aaKnown RBP18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 ECT2Q9H8V3 914 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 NMUR1Q9HB89 426 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 FAM86C1Q9NVL1 165 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 OSER1Q9NX31 292 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 TSPAN16Q9UKR8 245 aa18.89■□□□□ 0.61
IGHV3-47-201ENST00000425060 O00370 1275 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 CYP26A1O43174 497 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 PAEPP09466 180 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 MBL2P11226 248 aaPredicted RBP18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 ZNF132P52740 706 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 PKDCCQ504Y2 493 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 PIGZQ86VD9 579 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 TFAP2BQ92481 460 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 ZSWIM1Q9BR11 485 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 CYLDQ9NQC7 956 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 TLR8Q9NR97 1041 aaKnown RBP18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 SMPD4Q9NXE4 827 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 CNTN6Q9UQ52 1028 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
IGHV3-47-201ENST00000425060 GOLGA6L22H0YM25 854 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 TULP2O00295 520 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 TRDMT1O14717 391 aaKnown RBP18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 CD19P15391 556 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 GJA4P35212 333 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 NBL1P41271 181 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 IFNAR2P48551 515 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 PDE4CQ08493 712 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 MTAPQ13126 283 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 CCINQ13939 588 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 GAS6Q14393 721 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 PON2Q15165 354 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 GOLGA7BQ2TAP0 167 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 SCD5Q86SK9 330 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 ADGRG2Q8IZP9 1017 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 ATP2A3Q93084 1043 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 SPATA6Q9NWH7 488 aaPredicted RBP18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 CFAP97Q9P2B7 532 aa18.87■□□□□ 0.61
IGHV3-47-201ENST00000425060 A0A1W2PQH9 124 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 GTPBP10A4D1E9 387 aaKnown RBP18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 PROB1E7EW31 1015 aa18.86■□□□□ 0.61
IGHV3-47-201ENST00000425060 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms