RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 C12orf29Q8N999 325 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 ERCC4Q92889 916 aaPredicted RBP17.54■□□□□ 0.4
SHANK2-207ENST00000425049 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 SMOQ99835 787 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 RNF38Q9H0F5 515 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 GMIPQ9P107 970 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
SHANK2-207ENST00000425049 DMDP11532 3685 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 ANAPC1Q9H1A4 1944 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 CHURC1-FNTBB4DL54 471 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 RNF40O75150 1001 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 CILPO75339 1184 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 EGFP01133 1207 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 PPP1R2P41236 205 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 FNTBP49356 437 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 TUBP50607 506 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 GALK1P51570 392 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 FILIP1Q7Z7B0 1213 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 LONP2Q86WA8 852 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 CHFRQ96EP1 664 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 CYFIP2Q96F07 1278 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 FAXDC2Q96IV6 333 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 HNRNPABQ99729 332 aaKnown RBP17.53■□□□□ 0.4
SHANK2-207ENST00000425049 TLR8Q9NR97 1041 aaKnown RBP17.53■□□□□ 0.4
SHANK2-207ENST00000425049 RAB20Q9NX57 234 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 TBC1D14Q9P2M4 693 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 ARMCX3Q9UH62 379 aaPredicted RBP17.53■□□□□ 0.4
SHANK2-207ENST00000425049 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
SHANK2-207ENST00000425049 SH3BP1Q9Y3L3 701 aa17.53■□□□□ 0.4
SHANK2-207ENST00000425049 TNFRSF10BO14763 440 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 COCHO43405 550 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 ADH1CP00326 375 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 CNR2P34972 360 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 SIM2Q14190 667 aaPredicted RBP17.52■□□□□ 0.4
SHANK2-207ENST00000425049 ANKRD40Q6AI12 368 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 ZMIZ2Q8NF64 920 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 SPATA20Q8TB22 786 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 ACDQ96AP0 544 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 TWNKQ96RR1 684 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 LINC00597Q9H2U6 94 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 CSNK1G1Q9HCP0 422 aa17.52■□□□□ 0.4
SHANK2-207ENST00000425049 HELZP42694 1942 aaKnown RBP17.52■□□□□ 0.4
SHANK2-207ENST00000425049 OTOGLQ3ZCN5 2332 aa17.52■□□□□ 0.39
SHANK2-207ENST00000425049 GPR179Q6PRD1 2367 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 TRIM49BA6NDI0 452 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 K7ESF4 209 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 SCAMP3O14828 347 aaKnown RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 BEST1O76090 585 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 ZXDBP98169 803 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 SNX30Q5VWJ9 437 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 CLEC20AQ6ZU45 233 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 CEP68Q76N32 757 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 ELOA2Q8IYF1 753 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 DCLK2Q8N568 766 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 SEMA4DQ92854 862 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 HEXIM2Q96MH2 286 aaKnown RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 CCSER2Q9H7U1 834 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 PNPLA8Q9NP80 782 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 IL37Q9NZH6 218 aa17.51■□□□□ 0.39
SHANK2-207ENST00000425049 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
SHANK2-207ENST00000425049 E2F8A0AVK6 867 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 FAM92AA1XBS5 289 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 TLR5O60602 858 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 CYP17A1P05093 508 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 HOXA6P31267 233 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 SLC8A3P57103 927 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 DMWDQ09019 674 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 LPAL2Q16609 132 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 NAIF1Q69YI7 327 aaPredicted RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 LAIR1Q6GTX8 287 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 ZC3H3Q8IXZ2 948 aaKnown RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 RPLP0P6Q8NHW5 317 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 METTL14Q9HCE5 456 aaKnown RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 FBRSL1Q9HCM7 1045 aaKnown RBP17.5■□□□□ 0.39
SHANK2-207ENST00000425049 CISHQ9NSE2 258 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 C2orf42Q9NWW7 574 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
SHANK2-207ENST00000425049 CYP26A1O43174 497 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 ZDHHC11BP0C7U3 371 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 IRF1P10914 325 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 ID4P47928 161 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
SHANK2-207ENST00000425049 DHCR24Q15392 516 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
SHANK2-207ENST00000425049 PKN3Q6P5Z2 889 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms