RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 LARSQ9P2J5 1176 aaKnown RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 A8MXQ7 604 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CDK4P11802 303 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CDKL1Q00532 357 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CTBSQ01459 385 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 MYLK3Q32MK0 819 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ACAD11Q709F0 780 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF534Q76KX8 674 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 APLFQ8IW19 511 aaPredicted RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 EMC1Q8N766 993 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 MPP4Q96JB8 637 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 SENP7Q9BQF6 1050 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 TEKT3Q9BXF9 490 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 SLC13A1Q9BZW2 595 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 TDRD3Q9H7E2 651 aaKnown RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 PPARGC1AQ9UBK2 798 aaKnown RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 POLIQ9UNA4 740 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 PDLIM1O00151 329 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 LRCH4O75427 683 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ATG7O95352 703 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 IL1BP01584 269 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 TAZQ16635 292 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 TKFCQ3LXA3 575 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 TFDP3Q5H9I0 405 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 MIER3Q7Z3K6 550 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 LILRA2Q8N149 483 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF606Q8WXB4 792 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 PIWIL1Q96J94 861 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF512Q96ME7 567 aaPredicted RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ATXN10Q9UBB4 475 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 A0A0J9YVX5 310 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 SERPINB2P05120 415 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 GNA15P30679 374 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 KCNJ11Q14654 390 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 KLHDC10Q6PID8 442 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 WNK4Q96J92 1243 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 SORT1Q99523 831 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 DDX18Q9NVP1 670 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ZBTB14O43829 449 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 SLC5A2P31639 672 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 ORC1Q13415 861 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 FRMD7Q6ZUT3 714 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 TMEM179Q6ZVK1 233 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CCDC33Q8N5R6 958 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 GCNAQ96QF7 691 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 LIN28AQ9H9Z2 209 aaKnown RBP13.44□□□□□ -0.26
TOP2B-203ENST00000424225 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 FETUBQ9UGM5 382 aa13.44□□□□□ -0.26
TOP2B-203ENST00000424225 CNTNAP2Q9UHC6 1331 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TRIM49D1C9J1S8 452 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 KLF11O14901 512 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 CST8O60676 142 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 STAT2P52630 851 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 IRX4P78413 519 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 C1orf146Q5VVC0 180 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 PPIL6Q8IXY8 311 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 IL1RAPL1Q9NZN1 696 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 DNAJA2O60884 412 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 FBXO21O94952 628 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 UQCRBP14927 111 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 DPP6P42658 865 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 CETN1Q12798 172 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 CUL2Q13617 745 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 DPYSL3Q14195 570 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 NADK2Q4G0N4 442 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 RBM44Q6ZP01 1051 aaKnown RBP13.43□□□□□ -0.26
TOP2B-203ENST00000424225 LDHDQ86WU2 507 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TMC2Q8TDI7 906 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
TOP2B-203ENST00000424225 TMIGD2Q96BF3 282 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms