RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PREPLQ4J6C6 727 aaPredicted RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 LY6G5CQ5SRR4 150 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 SFR1Q86XK3 245 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 SLC41A1Q8IVJ1 513 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 ZNF513Q8N8E2 541 aaPredicted RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 SAAL1Q96ER3 474 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 ZNF419Q96HQ0 510 aaPredicted RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 CAMK1GQ96NX5 476 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 DUSP9Q99956 384 aaKnown RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 CCDC86Q9H6F5 360 aaKnown RBP17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 SMPD4Q9NXE4 827 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 HCN2Q9UL51 889 aa17.85■□□□□ 0.45
CHCHD3-202ENST00000423635 A0A1W2PQF6 199 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 SEC24BO95487 1268 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 WARSP23381 471 aaKnown RBP17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 KDSRQ06136 332 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 TAF10Q12962 218 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 MYO1EQ12965 1108 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 FAM84AQ96KN4 292 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 ACCSQ96QU6 501 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 PDE11AQ9HCR9 933 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 SEL1LQ9UBV2 794 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 PCDHB9Q9Y5E1 797 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 IGSF10Q6WRI0 2623 aa17.84■□□□□ 0.45
CHCHD3-202ENST00000423635 F8VP50 259 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 SCAMP3O14828 347 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 HOXC11O43248 304 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 TULP3O75386 442 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 ABL1P00519 1130 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 PDGFRBP09619 1106 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 FTH1P19P0C7X4 201 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 MBL2P11226 248 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 NTSR1P30989 418 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 CYP27A1Q02318 531 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 NUDT18Q6ZVK8 323 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 GLRX5Q86SX6 157 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 HPDLQ96IR7 371 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 SLITRK1Q96PX8 696 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 MTMR12Q9C0I1 747 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 DEC1Q9P2X7 70 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 CELSR3Q9NYQ7 3312 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 PLXNB3Q9ULL4 1909 aa17.83■□□□□ 0.44
CHCHD3-202ENST00000423635 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 TMEM191BP0C7N4 346 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 HOXB2P14652 356 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 GRIN1Q05586 938 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 BTBD8Q5XKL5 378 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 DYMQ7RTS9 669 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 PNPLA1Q8N8W4 532 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 RASSF8Q8NHQ8 419 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 ANKRD36BP1Q96IX9 119 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 ZFRQ96KR1 1074 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 KIAA1522Q9P206 1035 aaPredicted RBP17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 SUSD2Q9UGT4 822 aa17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 R3HCC1Q9Y3T6 440 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 GCN1Q92616 2671 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-202ENST00000423635 GOLGA8IPA6NC78 632 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 GOLGA8JA6NMD2 632 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 PLEKHG6Q3KR16 790 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 MIB1Q86YT6 1006 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 NAXDQ8IW45 347 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 NAT16Q8N8M0 369 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 TERB1Q8NA31 727 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 OVCA2Q8WZ82 227 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 HSPA12BQ96MM6 686 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 KIF2CQ99661 725 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 ZDHHC5Q9C0B5 715 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 SCUBE2Q9NQ36 999 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 PCDHB13Q9Y5F0 798 aa17.81■□□□□ 0.44
CHCHD3-202ENST00000423635 ZBTB24O43167 697 aaPredicted RBP17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 CBFA2T3O75081 653 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 BMP15O95972 392 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 GAP43P17677 238 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 NDUFV2P19404 249 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 C10orf76Q5T2E6 689 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 TOGARAM2Q6ZUX3 1019 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 NUP93Q8N1F7 819 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 PDZD8Q8NEN9 1154 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 OR5B17Q8NGF7 314 aa17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 IPO4Q8TEX9 1081 aaKnown RBP17.8■□□□□ 0.44
CHCHD3-202ENST00000423635 SPHK2Q9NRA0 654 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms