RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KRT12Q99456 494 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 TRIM56Q9BRZ2 755 aaKnown RBP3.71□□□□□ -1.81
TOP2A-201ENST00000423485 CRACR2AQ9BSW2 395 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 NUP58Q9BVL2 599 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 BBS2Q9BXC9 721 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 SLC12A9Q9BXP2 914 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 PXMP2Q9NR77 195 aa3.71□□□□□ -1.81
TOP2A-201ENST00000423485 A0A088AWK7 358 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 FAM221BA6H8Z2 402 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF839A8K0R7 811 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 POLR3GO15318 223 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 FLRT2O43155 660 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SLC25A17O43808 307 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GCNT3O95395 438 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 IL1BP01584 269 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 OCM2P0CE71 109 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 OCMP0CE72 109 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 BMP1P13497 986 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF10P21506 573 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 IFNA8P32881 189 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PPP3CCP48454 512 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PTDSS1P48651 473 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SPAG1Q07617 926 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TCEA2Q15560 299 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZKSCAN8Q15776 578 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GEN1Q17RS7 908 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 KBTBD12Q3ZCT8 623 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 AMZ1Q400G9 498 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TMC6Q7Z403 805 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 C14orf80Q86SX3 495 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SYNPOQ8N3V7 929 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MAB21L3Q8N8X9 362 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 COLGALT1Q8NBJ5 622 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CNDP2Q96KP4 475 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TIGD1Q96MW7 591 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ACCSQ96QU6 501 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PANX2Q96RD6 677 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 KIAA1586Q9HCI6 787 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 A1CFQ9NQ94 594 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CWC15Q9P013 229 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 C19orf25Q9UFG5 118 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 DAAM1Q9Y4D1 1078 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GPSM3Q9Y4H4 160 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 DOCK5Q9H7D0 1870 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 KIAA0355O15063 1070 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GPR37L1O60883 481 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 IPO13O94829 963 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 NTSR2O95665 410 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MOCS2O96007 188 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TNFP01375 233 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TXKP42681 527 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MTIF2P46199 727 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 LHX1P48742 406 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ANTXR2P58335 489 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TIMM10P62072 90 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TMED1Q13445 227 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZXDCQ2QGD7 858 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TTMPQ5BVD1 217 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 RETSATQ6NUM9 610 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CCAR2Q8N163 923 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 NXPE1Q8N323 547 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CCDC63Q8NA47 563 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 KLHL23Q8NBE8 558 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MGARPQ8TDB4 240 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SLC20A1Q8WUM9 679 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ACOX2Q99424 681 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 IRX2Q9BZI1 471 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 POLE4Q9NR33 117 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PDRG1Q9NUG6 133 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TMEM63CQ9P1W3 806 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 VPS18Q9P253 973 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 HDAC6Q9UBN7 1215 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SH3BGRL2Q9UJC5 107 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CFAP45Q9UL16 551 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 INVSQ9Y283 1065 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MAN2B2Q9Y2E5 1009 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PCDHGA5Q9Y5G8 931 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CLUHO75153 1309 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 PIPSLA2A3N6 862 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 LRRC14BA6NHZ5 514 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CHURC1-FNTBB4DL54 471 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CHL1O00533 1208 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 HS6ST1O60243 411 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 CDC45O75419 566 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 MBD3O95983 291 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ZBED1O96006 694 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ICAM1P05362 532 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SPATA31D3P0C874 917 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SRFP11831 508 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 BMP6P22004 513 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 GARSP41250 739 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 FNTBP49356 437 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 ALDH5A1P51649 535 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 KCNJ2P63252 427 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 COL9A2Q14055 689 aaPredicted RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 SEMA3AQ14563 771 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 NAA25Q14CX7 972 aa3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TRIP6Q15654 476 aaKnown RBP3.71□□□□□ -1.82
TOP2A-201ENST00000423485 TNNI3KQ59H18 835 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms