RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 MBL2P11226 248 aaPredicted RBP16.09■□□□□ 0.17
USB1-202ENST00000423271 CD58P19256 250 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 ADORA2BP29275 332 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 PRCPP42785 496 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 PGFP49763 221 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 MAP3K7CLP57077 242 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 AMPD2Q01433 879 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 ENPEPQ07075 957 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 GAB4Q2WGN9 574 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 PRR23BQ6ZRT6 265 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 FILIP1Q7Z7B0 1213 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 PDZD8Q8NEN9 1154 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 WHAMMQ8TF30 809 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 CD101Q93033 1021 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 IMPG2Q9BZV3 1241 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 NIF3L1Q9GZT8 377 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 CFAP97Q9P2B7 532 aa16.09■□□□□ 0.17
USB1-202ENST00000423271 CHORDC1Q9UHD1 332 aaPredicted RBP16.09■□□□□ 0.17
USB1-202ENST00000423271 MYOFQ9NZM1 2061 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 FAM92AA1XBS5 289 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 COCHO43405 550 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 HRO43593 1189 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 SMC2O95347 1197 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 NFATC1O95644 943 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 CYP17A1P05093 508 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 DRD1P21728 446 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 ID4P47928 161 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 PXNP49023 591 aaPredicted RBP16.08■□□□□ 0.16
USB1-202ENST00000423271 PMS1P54277 932 aaKnown RBP16.08■□□□□ 0.16
USB1-202ENST00000423271 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 LONP2Q86WA8 852 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.16
USB1-202ENST00000423271 GSDMAQ96QA5 445 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 CCSER2Q9H7U1 834 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 CSNK1G1Q9HCP0 422 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 CACNA1AO00555 2505 aa16.08■□□□□ 0.16
USB1-202ENST00000423271 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 CETN3O15182 167 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 FAM200BP0CF97 657 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 EPB41P11171 864 aaKnown RBP16.07■□□□□ 0.16
USB1-202ENST00000423271 OPRD1P41143 372 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 MXI1P50539 228 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 MCCD1P59942 119 aaPredicted RBP16.07■□□□□ 0.16
USB1-202ENST00000423271 HECTD3Q5T447 861 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 ZNF658Q5TYW1 1059 aaPredicted RBP16.07■□□□□ 0.16
USB1-202ENST00000423271 KRT39Q6A163 491 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 CLEC20AQ6ZU45 233 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 CYP3A43Q9HB55 503 aa16.07■□□□□ 0.16
USB1-202ENST00000423271 TRIM49BA6NDI0 452 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 ANTXRLA6NF34 631 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 HHLA1C9JL84 531 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 CILPO75339 1184 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 HOXA6P31267 233 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 GTF2H1P32780 548 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 NR1H3Q13133 447 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 SIM2Q14190 667 aaPredicted RBP16.06■□□□□ 0.16
USB1-202ENST00000423271 CAMK4Q16566 473 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 COBLL1Q53SF7 1204 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 WDR5BQ86VZ2 330 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
USB1-202ENST00000423271 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 WBP2Q969T9 261 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 HNRNPABQ99729 332 aaKnown RBP16.06■□□□□ 0.16
USB1-202ENST00000423271 ARID3AQ99856 593 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 COMMD8Q9NX08 183 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 GMEB2Q9UKD1 530 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
USB1-202ENST00000423271 CYP26A1O43174 497 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 ATG13O75143 517 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 TGM1P22735 817 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 TUBP50607 506 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 MESP2Q0VG99 397 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 DHCR24Q15392 516 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 ZNF394Q53GI3 561 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
USB1-202ENST00000423271 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 LAIR1Q6GTX8 287 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 C12orf40Q86WS4 652 aa16.05■□□□□ 0.16
USB1-202ENST00000423271 DDX42Q86XP3 938 aaKnown RBP eCLIP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms