RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CASP4P49662 377 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 AP3M2P53677 418 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 KDSRQ06136 332 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 DHCR24Q15392 516 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 TCEAL6Q6IPX3 200 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 CCDC33Q8N5R6 958 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 ZNF516Q92618 1163 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 TCEAL3Q969E4 200 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 CNOT6LQ96LI5 555 aaKnown RBP17.15■□□□□ 0.34
COL18A1-205ENST00000423214 DMAP1Q9NPF5 467 aaPredicted RBP17.15■□□□□ 0.34
COL18A1-205ENST00000423214 TBC1D14Q9P2M4 693 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 ADAMTS9Q9P2N4 1935 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 CAVIN2O95810 425 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 P4HA1P13674 534 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 EIF2DP41214 584 aaKnown RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 SLC5A3P53794 718 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 MRPS21P82921 87 aaKnown RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 NCOA4Q13772 614 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 GAB4Q2WGN9 574 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 SPACA7Q96KW9 195 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 PNKPQ96T60 521 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 NACA2Q9H009 215 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 VRTNQ9H8Y1 702 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 KRT82Q9NSB4 513 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
COL18A1-205ENST00000423214 PCDHA7Q9UN72 937 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 INVSQ9Y283 1065 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 SH3BP1Q9Y3L3 701 aa17.14■□□□□ 0.33
COL18A1-205ENST00000423214 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 BCLAF3A2AJT9 711 aaKnown RBP17.13■□□□□ 0.33
COL18A1-205ENST00000423214 COCHO43405 550 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 AP1G2O75843 785 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 KAT7O95251 611 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 KLF8O95600 359 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-205ENST00000423214 TRIM21P19474 475 aaKnown RBP17.13■□□□□ 0.33
COL18A1-205ENST00000423214 TIE1P35590 1138 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 CDH8P55286 799 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 CRY1Q16526 586 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 HECTD3Q5T447 861 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 BTBD8Q5XKL5 378 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 PMS2CLQ68D20 193 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 CYP2U1Q7Z449 544 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 RASSF3Q86WH2 238 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 ADGRG2Q8IZP9 1017 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 ALLCQ8N6M5 410 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 MDGA1Q8NFP4 955 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 PARD3BQ8TEW8 1205 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 OTUB2Q96DC9 234 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 POLMQ9NP87 494 aaPredicted RBP17.13■□□□□ 0.33
COL18A1-205ENST00000423214 ARHGEF4Q9NR80 690 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 BCCIPQ9P287 314 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL18A1-205ENST00000423214 ANGPTL2Q9UKU9 493 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 CFAP45Q9UL16 551 aa17.13■□□□□ 0.33
COL18A1-205ENST00000423214 IRF1P10914 325 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 ST3GAL2Q16842 350 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-205ENST00000423214 EOGTQ5NDL2 527 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 C12orf40Q86WS4 652 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
COL18A1-205ENST00000423214 PLEKHO2Q8TD55 490 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 KCNK16Q96T55 309 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 GON4LQ3T8J9 2241 aa17.12■□□□□ 0.33
COL18A1-205ENST00000423214 ASCC3Q8N3C0 2202 aaKnown RBP17.11■□□□□ 0.33
COL18A1-205ENST00000423214 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 GRIA2P42262 883 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 SLC6A11P48066 632 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 DHPSP49366 369 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-205ENST00000423214 TUBP50607 506 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 GAD2Q05329 585 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-205ENST00000423214 LY6G5CQ5SRR4 150 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 ACOT1Q86TX2 421 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 IL17RCQ8NAC3 791 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 KIAA0895Q8NCT3 520 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 GMIPQ9P107 970 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 USP24Q9UPU5 2620 aa17.11■□□□□ 0.33
COL18A1-205ENST00000423214 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 VNN1O95497 513 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 NR3C1P04150 777 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 CCDC130P13994 396 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 BCKDHBP21953 392 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
COL18A1-205ENST00000423214 ORC1Q13415 861 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 N4BP2L1Q5TBK1 243 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms