RNA–Protein interactions for RNA: ENST00000422254.5

HDAC7-207, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-207ENST00000422254 NME7Q9Y5B8 376 aa16.75■□□□□ 0.27
HDAC7-207ENST00000422254 RALGAPA1Q6GYQ0 2036 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 GTPBP10A4D1E9 387 aaKnown RBP16.74■□□□□ 0.27
HDAC7-207ENST00000422254 CCP110O43303 1012 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 LRP3O75074 770 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
HDAC7-207ENST00000422254 NR2F2P24468 414 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 ZNF77Q15935 545 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 WDR5BQ86VZ2 330 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 SPATA2LQ8IUW3 424 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-207ENST00000422254 WDR49Q8IV35 697 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 TRIM59Q8IWR1 403 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 SPC24Q8NBT2 197 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 PANX2Q96RD6 677 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 SYT15Q9BQS2 421 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 CRTAC1Q9NQ79 661 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 KCND1Q9NSA2 647 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 DMAC2Q9NW81 257 aa16.74■□□□□ 0.27
HDAC7-207ENST00000422254 A0A1W2PQJ5 194 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 ZNF500O60304 480 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 TNNC2P02585 160 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 NR3C1P04150 777 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 WARSP23381 471 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 PSMC1P62191 440 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 MYO1EQ12965 1108 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 USP4Q13107 963 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 MTF1Q14872 753 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 PDGFRLQ15198 375 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 VWA3BQ502W6 1294 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 NAIF1Q69YI7 327 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 TRAPPC11Q7Z392 1133 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 FMNL3Q8IVF7 1028 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 MYLPFQ96A32 169 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 NUCKS1Q9H1E3 243 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 KIAA1586Q9HCI6 787 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 AGPAT3Q9NRZ7 376 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 ARMCX3Q9UH62 379 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 CDH9Q9ULB4 789 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.73■□□□□ 0.27
HDAC7-207ENST00000422254 EML5Q05BV3 1969 aa16.73■□□□□ 0.27
HDAC7-207ENST00000422254 HELZP42694 1942 aaKnown RBP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 MYO16Q9Y6X6 1858 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 CCDC163A0A0D9SF12 145 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 STX10O60499 249 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 CST3P01034 146 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 EGFP01133 1207 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 TCF3P15923 654 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 GJA4P35212 333 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 GALK1P51570 392 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 UBXN1Q04323 297 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 CC2D1AQ6P1N0 951 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 VSTM1Q6UX27 236 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 FAM160A2Q8N612 972 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 OSCP1Q8WVF1 389 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 EZH1Q92800 747 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-207ENST00000422254 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 SEMA4GQ9NTN9 838 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
HDAC7-207ENST00000422254 TRAV19A0A0A6YYK7 116 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 C2orf78A6NCI8 922 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 PMM2O15305 246 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 RNF40O75150 1001 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 TUBB4AP04350 444 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 CKMP06732 381 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 USP17L7P0C7H9 530 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 BDNFP23560 247 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 USP46P62068 366 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 ZXDBP98169 803 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 PSMD6Q15008 389 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 CSRP2Q16527 193 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 SNRNP35Q16560 246 aaKnown RBP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 EML3Q32P44 896 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 ARL14EPQ8N8R7 260 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 PCED1BQ96HM7 432 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 CEP295NLQ96MC4 621 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 MRPL45Q9BRJ2 306 aaKnown RBP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 TRPC7Q9HCX4 862 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 POLR3BQ9NW08 1133 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 TAB2Q9NYJ8 693 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 WNT6Q9Y6F9 365 aa16.71■□□□□ 0.27
HDAC7-207ENST00000422254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC7-207ENST00000422254 SPAG17Q6Q759 2223 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms