RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LCP1P13796 627 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 CLCN1P35523 988 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 RGS7P49802 495 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 TKTL1P51854 596 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 HECTD3Q5T447 861 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 FAM71AQ8IYT1 594 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 SIX6OS1Q8N1H7 587 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 NAA15Q9BXJ9 866 aaKnown RBP16.6■□□□□ 0.25
BRAT1-202ENST00000421712 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 TRPV4Q9HBA0 871 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 ST7Q9NRC1 585 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
BRAT1-202ENST00000421712 DENND4CQ5VZ89 1909 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 SOBPA7XYQ1 873 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 F8VZ95 297 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 PIK3R2O00459 728 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 EPHB6O15197 1021 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 GFPT2O94808 682 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 FCARP24071 287 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 STAT1P42224 750 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 PLA2G4AP47712 749 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 ZNF445P59923 1031 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 ADIGQ0VDE8 80 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 VITQ6UXI7 678 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 CELF5Q8N6W0 485 aaKnown RBP16.59■□□□□ 0.25
BRAT1-202ENST00000421712 EDAQ92838 391 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 SLC22A12Q96S37 553 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 TRMT61BQ9BVS5 477 aaKnown RBP16.59■□□□□ 0.25
BRAT1-202ENST00000421712 ULBP1Q9BZM6 244 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 NAGPAQ9UK23 515 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 DUSP12Q9UNI6 340 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
BRAT1-202ENST00000421712 TTC28Q96AY4 2481 aa16.58■□□□□ 0.25
BRAT1-202ENST00000421712 A0A1W2PQH9 124 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 FAM92AA1XBS5 289 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 ZNF263O14978 683 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PRAMEF12O95522 483 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 CFHP08603 1231 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 MBL2P11226 248 aaPredicted RBP16.58■□□□□ 0.24
BRAT1-202ENST00000421712 RALAP11233 206 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 SRFP11831 508 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PFKLP17858 780 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PSMC3P17980 439 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 WEE1P30291 646 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 GDI1P31150 447 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 SOX5P35711 763 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 GPC5P78333 572 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PLCB2Q00722 1185 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 NR1I3Q14994 352 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PKDCCQ504Y2 493 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 TAF3Q5VWG9 929 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PMF1Q6P1K2 205 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 PASD1Q8IV76 773 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 BPIFB1Q8TDL5 484 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 DEPDC1BQ8WUY9 529 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 SLC35F5Q8WV83 523 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 USP13Q92995 863 aaPredicted RBP16.58■□□□□ 0.24
BRAT1-202ENST00000421712 BRD9Q9H8M2 597 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 THG1LQ9NWX6 298 aaKnown RBP16.58■□□□□ 0.24
BRAT1-202ENST00000421712 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 USP3Q9Y6I4 520 aa16.58■□□□□ 0.24
BRAT1-202ENST00000421712 ANAPC1Q9H1A4 1944 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 OBSL1O75147 1896 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 NCANO14594 1321 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 ZBED1O96006 694 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 TPM3P06753 285 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 CYP11B1P15538 503 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 GPD2P43304 727 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 ARID5AQ03989 594 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 RAB41Q5JT25 222 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
BRAT1-202ENST00000421712 ARHGAP18Q8N392 663 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 KCTD13Q8WZ19 329 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 NDRG1Q92597 394 aaKnown RBP16.57■□□□□ 0.24
BRAT1-202ENST00000421712 RSPRY1Q96DX4 576 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 HSFY1Q96LI6 401 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 MIS12Q9H081 205 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 CCSER2Q9H7U1 834 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 KIF9Q9HAQ2 790 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 SMPD4Q9NXE4 827 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 CCL26Q9Y258 94 aa16.57■□□□□ 0.24
BRAT1-202ENST00000421712 A0A1W2PQC6 194 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 COCHO43405 550 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 TLR5O60602 858 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 OAS1P00973 400 aaKnown RBP16.56■□□□□ 0.24
BRAT1-202ENST00000421712 ZDHHC11BP0C7U3 371 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 RARGP13631 454 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 ACADSBP45954 432 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 PGFP49763 221 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 PSEN1P49768 467 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms