RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELMO2Q96JJ3 720 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 OMDQ99983 421 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 ZC3H7BQ9UGR2 993 aaKnown RBP11.14□□□□□ -0.63
PTCH1-206ENST00000421141 F8VZ95 297 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CSH1P0DML2 217 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CSH2P0DML3 217 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 KCNA1Q09470 495 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 TRADDQ15628 312 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 RAMP2O60895 175 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CAND2O75155 1236 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CCNYL1Q8N7R7 359 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CFAP61Q8NHU2 1237 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 EDEM1Q92611 657 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SMPD4Q9NXE4 827 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 ATRNL1Q5VV63 1379 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 GEMP55040 296 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 ERMARDQ5T6L9 678 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CENPPQ6IPU0 288 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 LPPQ93052 612 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
PTCH1-206ENST00000421141 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 FGRP09769 529 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 GZMAP12544 262 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PTENP60484 403 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TEX12Q9BXU0 123 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 AP4E1Q9UPM8 1137 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 CASQ2O14958 399 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 CTIFO43310 598 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PPP3CCP48454 512 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 HECTD3Q5T447 861 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TSHZ1Q6ZSZ6 1077 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 BTBD7Q9P203 1132 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PCDHA2Q9Y5H9 948 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 CENPCQ03188 943 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 SPDYAQ5MJ70 313 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 C1orf186Q6ZWK4 172 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 SNX31Q8N9S9 440 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 SUSD6Q92537 303 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 GPR20Q99678 358 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 C12orf42Q96LP6 360 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 DDX47Q9H0S4 455 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TPX2Q9ULW0 747 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 C2CD2Q9Y426 696 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 ADH1CP00326 375 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 CLTBP09497 229 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PTPN1P18031 435 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PCK1P35558 622 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PSMD5Q16401 504 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 RNPEPQ9H4A4 650 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 Q9H521 79 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 ZNF510Q9Y2H8 683 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TXNDC9O14530 226 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 ZBTB39O15060 712 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TREHO43280 583 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 NPR3P17342 541 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 NR2C2P49116 596 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 MORF4L2Q15014 288 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 DDIASQ8IXT1 998 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 KIRREL3Q8IZU9 778 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
PTCH1-206ENST00000421141 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
PTCH1-206ENST00000421141 SPAG6O75602 509 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 CDC25CP30307 473 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 PHACTR4Q8IZ21 702 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 CCDC124Q96CT7 223 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 APOBEC2Q9Y235 224 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 HDAC4P56524 1084 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 YWHAZP63104 245 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 PLCL1Q15111 1095 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 SLC20A1Q8WUM9 679 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 FOXP3Q9BZS1 431 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
PTCH1-206ENST00000421141 HEATR9A2RTY3 570 aa11.12□□□□□ -0.63
PTCH1-206ENST00000421141 RBP3P10745 1247 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms