RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 SNX30Q5VWJ9 437 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 FUKQ8N0W3 1084 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 RPLP0P6Q8NHW5 317 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 SLC2A14Q8TDB8 520 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 OTUB2Q96DC9 234 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 GTPBP4Q9BZE4 634 aaKnown RBP22.6■■□□□ 1.21
PTPN4-202ENST00000420482 GOLPH3LQ9H4A5 285 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 TMEM30AQ9NV96 361 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 CFAP97Q9P2B7 532 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 HOOK1Q9UJC3 728 aaKnown RBP22.6■■□□□ 1.21
PTPN4-202ENST00000420482 CDV3Q9UKY7 258 aaKnown RBP22.6■■□□□ 1.21
PTPN4-202ENST00000420482 RPP40O75818 363 aaKnown RBP22.59■■□□□ 1.21
PTPN4-202ENST00000420482 ADH1CP00326 375 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 FAM200BP0CF97 657 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 CCDC192P0DO97 292 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 GTF2H1P32780 548 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 ASPAP45381 313 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 GCLMP48507 274 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 NUCB2P80303 420 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 SYT13Q7L8C5 426 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 TTC39CQ8N584 583 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 GAB3Q8WWW8 586 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 NT5C1AQ9BXI3 368 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 FBRSL1Q9HCM7 1045 aaKnown RBP22.59■■□□□ 1.21
PTPN4-202ENST00000420482 TMEM8AQ9HCN3 771 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 C2orf42Q9NWW7 574 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 CHORDC1Q9UHD1 332 aaPredicted RBP22.59■■□□□ 1.21
PTPN4-202ENST00000420482 SH3BP1Q9Y3L3 701 aa22.59■■□□□ 1.21
PTPN4-202ENST00000420482 E2F8A0AVK6 867 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 TNFRSF10BO14763 440 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 CETN3O15182 167 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 EPB41P11171 864 aaKnown RBP22.58■■□□□ 1.21
PTPN4-202ENST00000420482 CCDC130P13994 396 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 TGM1P22735 817 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 ZXDBP98169 803 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 SPEM2Q0P670 501 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 PREPLQ4J6C6 727 aaPredicted RBP22.58■■□□□ 1.21
PTPN4-202ENST00000420482 KRT39Q6A163 491 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 SPOPLQ6IQ16 392 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 PKN3Q6P5Z2 889 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 PAQR9Q6ZVX9 377 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 CACNA2D4Q7Z3S7 1137 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 ADGRG2Q8IZP9 1017 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 SCAMP5Q8TAC9 235 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 NIF3L1Q9GZT8 377 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 MMRN2Q9H8L6 949 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 GDPD2Q9HCC8 539 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 CSNK1G1Q9HCP0 422 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 TLR8Q9NR97 1041 aaKnown RBP22.58■■□□□ 1.21
PTPN4-202ENST00000420482 IL37Q9NZH6 218 aa22.58■■□□□ 1.21
PTPN4-202ENST00000420482 COCHO43405 550 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 SMC2O95347 1197 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 APBB3O95704 486 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 TRIM49P0CI25 452 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 TRIM49CP0CI26 452 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 EIF2DP41214 584 aaKnown RBP22.57■■□□□ 1.2
PTPN4-202ENST00000420482 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 GOLGA8FQ08AF8 430 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 GOLGA8DPQ0D2H9 430 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 INCA1Q0VD86 236 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 SRSF5Q13243 272 aaKnown RBP22.57■■□□□ 1.2
PTPN4-202ENST00000420482 C1orf220Q5T0J3 134 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 ELMO3Q96BJ8 720 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 FAXDC2Q96IV6 333 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 LOXL4Q96JB6 756 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 TSG101Q99816 390 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 FAM49BQ9NUQ9 324 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 TPRP12270 2363 aaKnown RBP22.57■■□□□ 1.2
PTPN4-202ENST00000420482 SPAG17Q6Q759 2223 aa22.57■■□□□ 1.2
PTPN4-202ENST00000420482 FAM92AA1XBS5 289 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-202ENST00000420482 CYP17A1P05093 508 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 ADORA2BP29275 332 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 ORC1Q13415 861 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 DMC1Q14565 340 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 DHCR24Q15392 516 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 BTBD8Q5XKL5 378 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 NUDT18Q6ZVK8 323 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 FAM160A2Q8N612 972 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-202ENST00000420482 TAS1R2Q8TE23 839 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 CYFIP2Q96F07 1278 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 GSDMAQ96QA5 445 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 PNKPQ96T60 521 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 HNRNPABQ99729 332 aaKnown RBP22.56■■□□□ 1.2
PTPN4-202ENST00000420482 SMOQ99835 787 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 PNPLA8Q9NP80 782 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 PARD6AQ9NPB6 346 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 SEMA4GQ9NTN9 838 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 GMIPQ9P107 970 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 HMGXB4Q9UGU5 601 aa22.56■■□□□ 1.2
PTPN4-202ENST00000420482 AXIN1O15169 862 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 PXNP49023 591 aaPredicted RBP22.55■■□□□ 1.2
PTPN4-202ENST00000420482 PPP3CAQ08209 521 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 CSRP2Q16527 193 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 ZCWPW2Q504Y3 356 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 NAIF1Q69YI7 327 aaPredicted RBP22.55■■□□□ 1.2
PTPN4-202ENST00000420482 C12orf29Q8N999 325 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.55■■□□□ 1.2
PTPN4-202ENST00000420482 PCDHA5Q9Y5H7 936 aa22.55■■□□□ 1.2
PTPN4-202ENST00000420482 APODP05090 189 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms