RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 UNC93AQ86WB7 457 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 CPA6Q8N4T0 437 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 KIAA1958Q8N8K9 716 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 SLC2A14Q8TDB8 520 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 OVCA2Q8WZ82 227 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 SEMA4DQ92854 862 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 ERCC4Q92889 916 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 ATP2A3Q93084 1043 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 FBXO32Q969P5 355 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 EEF2KMTQ96G04 330 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 SLITRK1Q96PX8 696 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 P2RY13Q9BPV8 354 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 PARD6AQ9NPB6 346 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 DMAP1Q9NPF5 467 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 EHD2Q9NZN4 543 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 CPQQ9Y646 472 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.54
SSBP3-206ENST00000420121 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 COCHO43405 550 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 CILPO75339 1184 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 AP1G2O75843 785 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 P4HA1P13674 534 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 DRD1P21728 446 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 ID4P47928 161 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 PDE6CP51160 858 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 MESP2Q0VG99 397 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 CLEC20AQ6ZU45 233 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 GPRIN1Q7Z2K8 1008 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 LONP2Q86WA8 852 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 ADGRG2Q8IZP9 1017 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 CD101Q93033 1021 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 WBP2Q969T9 261 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 HNRNPABQ99729 332 aaKnown RBP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 MED10Q9BTT4 135 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 NIF3L1Q9GZT8 377 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 CCSER2Q9H7U1 834 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 SMPD4Q9NXE4 827 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 GMIPQ9P107 970 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
SSBP3-206ENST00000420121 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-206ENST00000420121 NFATC1O95644 943 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 ABL1P00519 1130 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 KRT13P13646 458 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 GTF2H1P32780 548 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 MAP3K7CLP57077 242 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 NUCB2P80303 420 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 AMPD2Q01433 879 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 BECN1Q14457 450 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 LPAL2Q16609 132 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 ZNF658Q5TYW1 1059 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-206ENST00000420121 SFTPA1Q8IWL2 248 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 GSDMAQ96QA5 445 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 MMRN2Q9H8L6 949 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 CYP3A43Q9HB55 503 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 OSER1Q9NX31 292 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 CFAP97Q9P2B7 532 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 PCDHA5Q9Y5H7 936 aa11.69□□□□□ -0.54
SSBP3-206ENST00000420121 PLXND1Q9Y4D7 1925 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 K7EQS6 105 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 GREM1O60565 184 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CLSTN1O94985 981 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CD58P19256 250 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 ADORA2BP29275 332 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CNR2P34972 360 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 PXNP49023 591 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-206ENST00000420121 MXI1P50539 228 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 TUBP50607 506 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 DHCR24Q15392 516 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 FBXO43Q4G163 708 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CBWD6Q4V339 395 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CBWD3Q5JTY5 395 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CBWD5Q5RIA9 395 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 KRT39Q6A163 491 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 LAIR1Q6GTX8 287 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 RHBDF2Q6PJF5 856 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 C12orf40Q86WS4 652 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 PHTF2Q8N3S3 785 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 RPLP0P6Q8NHW5 317 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 CYFIP2Q96F07 1278 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 TIGD1Q96MW7 591 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 ARID3AQ99856 593 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
SSBP3-206ENST00000420121 NT5C1AQ9BXI3 368 aa11.68□□□□□ -0.54
SSBP3-206ENST00000420121 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms