RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 LMO2P25791 158 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 DDIT3P35638 169 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 LONP1P36776 959 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 TNFRSF4P43489 277 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 PPP3CCP48454 512 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 KDSRQ06136 332 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 MAPRE1Q15691 268 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 L1TD1Q5T7N2 865 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 SLC36A4Q6YBV0 504 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 RABEPKQ7Z6M1 372 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 PCED1BQ96HM7 432 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 GTPBP2Q9BX10 602 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 PDE11AQ9HCR9 933 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 DNAAF2Q9NVR5 837 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 EHD2Q9NZN4 543 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 CFAP97Q9P2B7 532 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 MAGEC2Q9UBF1 373 aaPredicted RBP10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 EXOC7Q9UPT5 735 aa10.89□□□□□ -0.67
TNFAIP3-202ENST00000420009 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 F8VP50 259 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 TRIM66O15016 1216 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 HOXC11O43248 304 aaPredicted RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 GJB3O75712 270 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 BMP15O95972 392 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 LDHAP00338 332 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 GABRG2P18507 467 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 ANXA13P27216 316 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 RDXP35241 583 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 GRIK1P39086 918 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 CASP5P51878 434 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 RPL6Q02878 288 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 GFPT1Q06210 699 aaPredicted RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 DYMQ7RTS9 669 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 OR2I1PQ8NGU4 316 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 RASSF8Q8NHQ8 419 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 MYCBPAPQ8TBZ2 947 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 KCNV2Q8TDN2 545 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 C8orf48Q96LL4 319 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 ACCSQ96QU6 501 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 CBWD1Q9BRT8 395 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 CD248Q9HCU0 757 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 OLFML3Q9NRN5 406 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 TMEM30AQ9NV96 361 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 HCN2Q9UL51 889 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 NME7Q9Y5B8 376 aa10.88□□□□□ -0.67
TNFAIP3-202ENST00000420009 PI4KAP42356 2102 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 IGHV1OR15-9A0A0B4J2B8 117 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 A0A1W2PQD8 194 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 E2F8A0AVK6 867 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 GOLGA8IPA6NC78 632 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 GOLGA8JA6NMD2 632 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 ARHGAP33O14559 1287 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 GAP43P17677 238 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 CACNA2D1P54289 1103 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 SCAPQ12770 1279 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 TAF10Q12962 218 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 MYO1EQ12965 1108 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 SLC14A1Q13336 389 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 LY6G5CQ5SRR4 150 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 TRMT11Q7Z4G4 463 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 SLC41A1Q8IVJ1 513 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 TERB1Q8NA31 727 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 OR5B17Q8NGF7 314 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 ADAMTS14Q8WXS8 1223 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 DNAJC19Q96DA6 116 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 OTUB2Q96DC9 234 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 HPDLQ96IR7 371 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 INTS13Q9NVM9 706 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 TBC1D14Q9P2M4 693 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
TNFAIP3-202ENST00000420009 GON4LQ3T8J9 2241 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 ADAMTS20P59510 1910 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 H3BQV1 296 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 SH3BP5O60239 455 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 TULP3O75386 442 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 GCNT3O95395 438 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 HOXB2P14652 356 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 GAD2Q05329 585 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 ALCAMQ13740 583 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 SOWAHCQ53LP3 525 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 MDH1BQ5I0G3 518 aa10.86□□□□□ -0.67
TNFAIP3-202ENST00000420009 USP49Q70CQ1 688 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms