RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 JAMLQ86YT9 394 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 PIP4K2CQ8TBX8 421 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 MS4A14Q96JA4 679 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 LRRC1Q9BTT6 524 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 IL25Q9H293 177 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 IL17RBQ9NRM6 502 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 MEFVO15553 781 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 KIF1CO43896 1103 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 CLASP2O75122 1294 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 SNRPAP09012 282 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 CYP11B1P15538 503 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 KLK7P49862 253 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 PTPN11Q06124 597 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 PTK7Q13308 1070 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ORC1Q13415 861 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ZPBP2Q6X784 338 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 PRUNE1Q86TP1 453 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 TMEM199Q8N511 208 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 STAMBPL1Q96FJ0 436 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RIC8BQ9NVN3 520 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 FOXN3O00409 490 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 ACKR2O00590 384 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 SOAT2O75908 522 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RTN3O95197 1032 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 HSPA1AP0DMV8 641 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 HSPA1BP0DMV9 641 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 ADCYAP1R1P41586 468 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RAP1GAPP47736 663 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 SERPINB4P48594 390 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 MYL6P60660 151 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RHOAP61586 193 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 STX3Q13277 289 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBR4-206ENST00000419533 FAM172AQ8WUF8 416 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ZNF669Q96BR6 464 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 NAF1Q96HR8 494 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 CEP19Q96LK0 163 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ING2Q9H160 280 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 SCOCQ9UIL1 159 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 MSRAQ9UJ68 235 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 TRMT6Q9UJA5 497 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 PMPCBO75439 489 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 FARP2O94887 1054 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 RENBPP51606 427 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 TKTL1P51854 596 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 HDAC4P56524 1084 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 FAM171A1Q5VUB5 890 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 AGR3Q8TD06 166 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 DEFB118Q96PH6 123 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 SENP6Q9GZR1 1112 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 CISHQ9NSE2 258 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 BARX2Q9UMQ3 279 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 UMODL1Q5DID0 1318 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RNF103-CHMP3A0A140T963 221 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 GYPCP04921 128 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 APOA4P06727 396 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 OCM2P0CE71 109 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 OCMP0CE72 109 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 GZMAP12544 262 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 IL10P22301 178 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 MAGEA4P43358 317 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 LBX1P52954 281 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 LRRC14Q15048 493 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 PPM1LQ5SGD2 360 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 TREML2Q5T2D2 321 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 E4F1Q66K89 784 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 LRRC8EQ6NSJ5 796 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 OR9Q1Q8NGQ5 310 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 BLOC1S5Q8TDH9 187 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 XPO6Q96QU8 1125 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 PRPF18Q99633 342 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 A1CFQ9NQ94 594 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 CNTNAP2Q9UHC6 1331 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ZNF185O15231 689 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 LGALS2P05162 132 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 TUFMP49411 452 aaKnown RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 ZDHHC17Q8IUH5 632 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 RIBC1Q8N443 379 aaPredicted RBP8.75□□□□□ -1.01
UBR4-206ENST00000419533 TC2NQ8N9U0 490 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 SMARCD1Q96GM5 515 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 CNPY3Q9BT09 278 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 THAP2Q9H0W7 228 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 ANLNQ9NQW6 1124 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 PCMTD2Q9NV79 361 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 NMRK1Q9NWW6 199 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 SPACA6W5XKT8 324 aa8.75□□□□□ -1.01
UBR4-206ENST00000419533 NFASCO94856 1347 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 PRR23AA6NEV1 266 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ARIH2O95376 493 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 ITGALP20701 1170 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
UBR4-206ENST00000419533 FNTAP49354 379 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 CASP4P49662 377 aa8.74□□□□□ -1.01
UBR4-206ENST00000419533 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms