RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 GJA9P57773 515 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ORC1Q13415 861 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KCNT1Q5JUK3 1230 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 UBXN11Q5T124 520 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TTC19Q6DKK2 380 aaPredicted RBP15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PMF1Q6P1K2 205 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CACNA2D3Q8IZS8 1091 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PPM1EQ8WY54 764 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HSPH1Q92598 858 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 C11orf84Q9BUA3 381 aaPredicted RBP15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 UPF3AQ9H1J1 476 aaKnown RBP15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SAYSD1Q9NPB0 183 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GJD2Q9UKL4 321 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM169AQ9Y6X4 670 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 BCLAF3A2AJT9 711 aaKnown RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 APOL1O14791 398 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PAPSS1O43252 624 aaPredicted RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RAB27AP51159 221 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MRPS6P82932 125 aaKnown RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PDE4CQ08493 712 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM62Q0P6H9 643 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CCDC14Q49A88 953 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CYP4V2Q6ZWL3 525 aaPredicted RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CPLX4Q7Z7G2 160 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 EXOC3L1Q86VI1 746 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ADGRF2Q8IZF7 708 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 C12orf29Q8N999 325 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NAT8LQ8N9F0 302 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM172AQ8WUF8 416 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KBTBD7Q8WVZ9 684 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KCTD13Q8WZ19 329 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FERMT1Q9BQL6 677 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FLRT1Q9NZU1 646 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PCSK1NQ9UHG2 260 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SMG5Q9UPR3 1016 aaKnown RBP15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TRPV2Q9Y5S1 764 aa15.18■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ARHGEF37A1IGU5 675 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FBXO21O94952 628 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MAGEA9P43362 315 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 LHX1P48742 406 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ZNF135P52742 658 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ITIH4Q14624 930 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FOXR1Q6PIV2 292 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CDKL3Q8IVW4 592 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM40Q8WWA1 233 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 C18orf25Q96B23 403 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ZNF317Q96PQ6 595 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NGRNQ9NPE2 291 aaKnown RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM51Q9NW97 253 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NKIRAS1Q9NYS0 192 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SAMD15Q9P1V8 674 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MAGEA6P43360 314 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SLCO1A2P46721 670 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 BCAR1P56945 870 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 LILRA4P59901 499 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DYNLT1P63172 113 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 IFI35P80217 286 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 B3GALNT2Q8NCR0 500 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CPT1BQ92523 772 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 APBB2Q92870 758 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PPP1R10Q96QC0 940 aaKnown RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PEBP4Q96S96 227 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM118BQ9BPY3 351 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KLC2Q9H0B6 622 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ACTR5Q9H9F9 607 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CDHR5Q9HBB8 845 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM49BQ9NUQ9 324 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RRN3Q9NYV6 651 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PSMC3IPQ9P2W1 217 aaPredicted RBP15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GIT1Q9Y2X7 761 aa15.17■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CLUHO75153 1309 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM120BA0PK00 339 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PRPF4O43172 522 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DAB1O75553 588 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GSTA2P09210 222 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CYP2B6P20813 491 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SEC24CP53992 1094 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FCGRTP55899 365 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ANKRD20A8PQ5CZ79 823 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 EFHC2Q5JST6 749 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GLRA4Q5JXX5 417 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM43BQ6ZT52 329 aaPredicted RBP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SAPCD2Q86UD0 394 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ZBED8Q8IZ13 594 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms