RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 KRT5P13647 590 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 AOC1P19801 751 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 COL9A1P20849 921 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 PSEN1P49768 467 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 ZNF132P52740 706 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 NUBP1P53384 320 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 BST2Q10589 180 aaKnown RBP17.06■□□□□ 0.32
SNHG17-203ENST00000417578 CNGA2Q16280 664 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 C1orf228Q6PIY5 440 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 LCLAT1Q6UWP7 414 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 MSANTD3Q96H12 275 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 NELL2Q99435 816 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 PRRX2Q99811 253 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 DDX23Q9BUQ8 820 aaKnown RBP17.06■□□□□ 0.32
SNHG17-203ENST00000417578 RNF38Q9H0F5 515 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 KCNH6Q9H252 994 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 GMIPQ9P107 970 aa17.06■□□□□ 0.32
SNHG17-203ENST00000417578 MRPS17Q9Y2R5 130 aaKnown RBP17.06■□□□□ 0.32
SNHG17-203ENST00000417578 ZDBF2Q9HCK1 2354 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 ARNTLO00327 626 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 SETSIPP0DME0 302 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 MBL2P11226 248 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 PDE4CQ08493 712 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 MTF1Q14872 753 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 ZNF77Q15935 545 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 IER5LQ5T953 404 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 CWF19L1Q69YN2 538 aaKnown RBP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 ZNF852Q6ZMS4 543 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 TPRG1Q6ZUI0 275 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 PIGZQ86VD9 579 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 TTC30AQ86WT1 665 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 KIAA1958Q8N8K9 716 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 FAM83CQ9BQN1 747 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 C8orf33Q9H7E9 229 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-203ENST00000417578 GKN1Q9NS71 199 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 USP3Q9Y6I4 520 aa17.05■□□□□ 0.32
SNHG17-203ENST00000417578 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 KIF26AQ9ULI4 1882 aaPredicted RBP17.04■□□□□ 0.32
SNHG17-203ENST00000417578 MED7O43513 233 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 KPNA1P52294 538 aaPredicted RBP17.04■□□□□ 0.32
SNHG17-203ENST00000417578 VCPP55072 806 aaKnown RBP17.04■□□□□ 0.32
SNHG17-203ENST00000417578 PDGFRLQ15198 375 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 ARHGAP44Q17R89 818 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 SKOR2Q2VWA4 1001 aaPredicted RBP17.04■□□□□ 0.32
SNHG17-203ENST00000417578 ANO6Q4KMQ2 910 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 RAB41Q5JT25 222 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 GJB7Q6PEY0 223 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 TADA2BQ86TJ2 420 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 UBA3Q8TBC4 463 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 ZFYVE19Q96K21 471 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 OSBPL6Q9BZF3 934 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 NACA2Q9H009 215 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 VPS16Q9H269 839 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 LRRC4Q9HBW1 653 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 TAB2Q9NYJ8 693 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG17-203ENST00000417578 SIT1Q9Y3P8 196 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 CPQQ9Y646 472 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
SNHG17-203ENST00000417578 SMTNL1A8MU46 457 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 LEFTY2O00292 366 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 NCAM2O15394 837 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 CYP26A1O43174 497 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 COCHO43405 550 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 BRD2P25440 801 aaKnown RBP17.03■□□□□ 0.32
SNHG17-203ENST00000417578 USP8P40818 1118 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 PLA2G4AP47712 749 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 IFNAR2P48551 515 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 TKTL1P51854 596 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 AMPD2Q01433 879 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 USP4Q13107 963 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 RUNX3Q13761 415 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 KRT31Q15323 416 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 ARHGAP18Q8N392 663 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 ZNF276Q8N554 614 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 TMEM105Q8N8V8 129 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 OSCP1Q8WVF1 389 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 KCTD13Q8WZ19 329 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 CDK5RAP1Q96SZ6 601 aaKnown RBP17.03■□□□□ 0.32
SNHG17-203ENST00000417578 CCSER2Q9H7U1 834 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 SIX2Q9NPC8 291 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 CYLDQ9NQC7 956 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 DUS2Q9NX74 493 aaKnown RBP17.03■□□□□ 0.32
SNHG17-203ENST00000417578 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
SNHG17-203ENST00000417578 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
SNHG17-203ENST00000417578 COL4A2P08572 1712 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms