RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 UPK3BL1B0FP48 263 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 UPK3BL2E5RIL1 263 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 KIAA0391O15091 583 aaKnown RBP19.17■□□□□ 0.66
VCP-202ENST00000417448 TADA3O75528 432 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 KIF20AO95235 890 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 NR2F2P24468 414 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 DDX6P26196 483 aaKnown RBP eCLIP19.17■□□□□ 0.66
VCP-202ENST00000417448 SEC13P55735 322 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 DLG4P78352 724 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 SCAPQ12770 1279 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 ZNF77Q15935 545 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 TAF12Q16514 161 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 EML3Q32P44 896 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 ZCWPW2Q504Y3 356 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 C2orf27AQ580R0 203 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 RAB44Q7Z6P3 723 aaPredicted RBP19.17■□□□□ 0.66
VCP-202ENST00000417448 GOLGA5Q8TBA6 731 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 OSCP1Q8WVF1 389 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 ELMO3Q96BJ8 720 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 CGNQ9P2M7 1197 aaKnown RBP19.17■□□□□ 0.66
VCP-202ENST00000417448 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 DERAQ9Y315 318 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 WNT6Q9Y6F9 365 aa19.17■□□□□ 0.66
VCP-202ENST00000417448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 K7EQS6 105 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 TNFRSF10BO14763 440 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 ITGB3P05106 788 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 HAPLN1P10915 354 aaPredicted RBP19.16■□□□□ 0.66
VCP-202ENST00000417448 POLR2BP30876 1174 aaKnown RBP19.16■□□□□ 0.66
VCP-202ENST00000417448 ADAM9Q13443 819 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 ZNF268Q14587 947 aaPredicted RBP19.16■□□□□ 0.66
VCP-202ENST00000417448 SLC23A3Q6PIS1 610 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 TMEM92Q6UXU6 159 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 MON1AQ86VX9 555 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 SYT12Q8IV01 421 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 TMEFF1Q8IYR6 380 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 C1orf127Q8N9H9 656 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 EXOC4Q96A65 974 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 SLC22A12Q96S37 553 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 INTS13Q9NVM9 706 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 DUS2Q9NX74 493 aaKnown RBP19.16■□□□□ 0.66
VCP-202ENST00000417448 AGAP1Q9UPQ3 857 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 C2CD2Q9Y426 696 aa19.16■□□□□ 0.66
VCP-202ENST00000417448 ANO9A1A5B4 782 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 H0Y626 953 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 PIRO00625 290 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 XPOTO43592 962 aaKnown RBP19.15■□□□□ 0.66
VCP-202ENST00000417448 TRIM16O95361 564 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 CYP11A1P05108 521 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 KRT19P08727 400 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 TMEM191BP0C7N4 346 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 TNNI1P19237 187 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 P2RY2P41231 377 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 GPR15P49685 360 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 PSMD6Q15008 389 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 CRY1Q16526 586 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 TTC30AQ86WT1 665 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 SLC9A9Q8IVB4 645 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 CCDC33Q8N5R6 958 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 CSGALNACT2Q8N6G5 542 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 TTC16Q8NEE8 873 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 ABI2Q9NYB9 513 aaPredicted RBP19.15■□□□□ 0.66
VCP-202ENST00000417448 SIX4Q9UIU6 781 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 MMP17Q9ULZ9 603 aa19.15■□□□□ 0.66
VCP-202ENST00000417448 PTPRBP23467 1997 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 CHRM1P11229 460 aaPredicted RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 OPRD1P41143 372 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 POU5F1Q01860 360 aaKnown RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 USP4Q13107 963 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 GAB4Q2WGN9 574 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 COBLL1Q53SF7 1204 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 PEAR1Q5VY43 1037 aaPredicted RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 LPCAT2Q7L5N7 544 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 SFTPA1Q8IWL2 248 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 CXorf38Q8TB03 319 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 CACTINQ8WUQ7 758 aaKnown RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 CYP2S1Q96SQ9 504 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 CGRRF1Q99675 332 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
VCP-202ENST00000417448 PILRBQ9UKJ0 227 aa19.14■□□□□ 0.65
VCP-202ENST00000417448 CST3P01034 146 aaPredicted RBP19.13■□□□□ 0.65
VCP-202ENST00000417448 TNNC2P02585 160 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 TRIM49P0CI25 452 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 TRIM49CP0CI26 452 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 ITPKAP23677 461 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 C1orf220Q5T0J3 134 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 SDHAF4Q5VUM1 108 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 FAM186BQ8IYM0 893 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 OR2I1PQ8NGU4 316 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 SPPL2BQ8TCT7 592 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 PARD3BQ8TEW8 1205 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 C2orf15Q8WU43 125 aaKnown RBP19.13■□□□□ 0.65
VCP-202ENST00000417448 MRPS31Q92665 395 aaKnown RBP19.13■□□□□ 0.65
VCP-202ENST00000417448 ANKRD36BP1Q96IX9 119 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 TSPAN18Q96SJ8 248 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 TSG101Q99816 390 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms