RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TMEM105Q8N8V8 129 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 LMO3Q8TAP4 145 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 VPS16Q9H269 839 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 CCSER2Q9H7U1 834 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 PNPLA8Q9NP80 782 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 DUS2Q9NX74 493 aaKnown RBP11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 GTSE1Q9NYZ3 720 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 APEX2Q9UBZ4 518 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 NAGPAQ9UK23 515 aa11.66□□□□□ -0.54
TM9SF4-203ENST00000417389 MYH10P35580 1976 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 A0A1W2PQH9 124 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 LEFTY2O00292 366 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 NCAM2O15394 837 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 THAP12O43422 761 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PI15O43692 258 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 TLR5O60602 858 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 CALCAP01258 141 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 RALAP11233 206 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PFKLP17858 780 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 AOC1P19801 751 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PON1P27169 355 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 SOX9P48436 509 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 TKTL1P51854 596 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 STARD6P59095 220 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 APBA1Q02410 837 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PDE4CQ08493 712 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 GOLGA8FQ08AF8 430 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 GOLGA8DPQ0D2H9 430 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 RAPGEF1Q13905 1077 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 STILQ15468 1287 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 ANO6Q4KMQ2 910 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 C10orf120Q5SQS8 335 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 CWF19L1Q69YN2 538 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 RSRC2Q7L4I2 434 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PIGZQ86VD9 579 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 CPA6Q8N4T0 437 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PJA1Q8NG27 643 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 FAM3CQ92520 227 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 KREMEN1Q96MU8 473 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 RNF38Q9H0F5 515 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 C8orf33Q9H7E9 229 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 ARHGAP26Q9UNA1 814 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 SCML2Q9UQR0 700 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 SH3BP1Q9Y3L3 701 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 WNT6Q9Y6F9 365 aa11.65□□□□□ -0.54
TM9SF4-203ENST00000417389 PTPRDP23468 1912 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 GTPBP10A4D1E9 387 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 BECN2A8MW95 431 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 HHLA1C9JL84 531 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 O00370 1275 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 PIK3R2O00459 728 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 XPO1O14980 1071 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 COCHO43405 550 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 MED7O43513 233 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 OAS1P00973 400 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 SETSIPP0DME0 302 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 RARGP13631 454 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 LCP1P13796 627 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ARSAP15289 507 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 GNA15P30679 374 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ATP5C1P36542 298 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 RGS7P49802 495 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 KIF11P52732 1056 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 AMPD2Q01433 879 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 NR1H3Q13133 447 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 KRT31Q15323 416 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ZNF77Q15935 545 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 KLHL40Q2TBA0 621 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 UBR7Q8N806 425 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 GOLGA1Q92805 767 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 SECISBP2LQ93073 1101 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 NELL2Q99435 816 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 PRRX2Q99811 253 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 PDCL3Q9H2J4 239 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 LTB4R2Q9NPC1 389 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 TRPV5Q9NQA5 729 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 NUDT5Q9UKK9 219 aa11.64□□□□□ -0.55
TM9SF4-203ENST00000417389 ZNF638Q14966 1978 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 SYCE3A1L190 88 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 SPECC1L-ADORA2AF8WAN1 911 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 TULP2O00295 520 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms