RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 IQCGQ9H095 443 aaKnown RBP18.76■□□□□ 0.59
SCARB1-203ENST00000415380 MMADHCQ9H3L0 296 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.76■□□□□ 0.598e-7■■□□□ 12.1
SCARB1-203ENST00000415380 TTLL3Q9Y4R7 772 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 TBX10O75333 385 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 TNNC2P02585 160 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 CNTN2Q02246 1040 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 PPM1NQ8N819 430 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SCG3Q8WXD2 468 aaKnown RBP18.76■□□□□ 0.59
SCARB1-203ENST00000415380 MECRQ9BV79 373 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 PNPLA8Q9NP80 782 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SPDYE5A6NIY4 337 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 UBA1P22314 1058 aaKnown RBP18.75■□□□□ 0.59
SCARB1-203ENST00000415380 SH3PXD2AQ5TCZ1 1133 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 TMEM154Q6P9G4 183 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 LRRC74BQ6ZQY2 392 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 CTAGE3PQ8IX95 158 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 DTX3LQ8TDB6 740 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 ZNF483Q8TF39 744 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-203ENST00000415380 SDCBP2Q9H190 292 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 AS3MTQ9HBK9 375 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 LCTP09848 1927 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 CHADO15335 359 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 KRT19P08727 400 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 PTPRAP18433 802 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 CPA2P48052 419 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 STAT5BP51692 787 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 CDH6P55285 790 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 YWHAZP63104 245 aaKnown RBP18.75■□□□□ 0.59
SCARB1-203ENST00000415380 LBRQ14739 615 aaKnown RBP18.75■□□□□ 0.59
SCARB1-203ENST00000415380 FAM91A1Q658Y4 838 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 TMEM130Q8N3G9 435 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 MCRS1Q96EZ8 462 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 ANKRD36BP1Q96IX9 119 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 TWNKQ96RR1 684 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 RAB6BQ9NRW1 208 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.75■□□□□ 0.593e-8■□□□□ 10.2
SCARB1-203ENST00000415380 HMGXB4Q9UGU5 601 aa18.75■□□□□ 0.59
SCARB1-203ENST00000415380 ENO4A6NNW6 628 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 CXorf49A8MYA2 514 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 H7C0C1 242 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 ATP5OP48047 213 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 GCLCP48506 637 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 OCRLQ01968 901 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 RAB6CQ53S08 254 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 WDR78Q5VTH9 848 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 RNF149Q8NC42 400 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 UCMAQ8WVF2 138 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 STMN2Q93045 179 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 RAB6CQ9H0N0 254 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 ASNSD1Q9NWL6 643 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 MICAL2O94851 1124 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 FARP2O94887 1054 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 ENDOD1O94919 500 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 PGM1P36871 562 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 ACAP1Q15027 740 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 IRGCQ6NXR0 463 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 C1orf228Q6PIY5 440 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 PDCD7Q8N8D1 485 aaKnown RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 CEP120Q8N960 986 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 SLC4A11Q8NBS3 891 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 ADPGKQ9BRR6 497 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 BCO2Q9BYV7 579 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 STX18Q9P2W9 335 aaKnown RBP18.74■□□□□ 0.59
SCARB1-203ENST00000415380 FZD1Q9UP38 647 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 LRCH1Q9Y2L9 728 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 PLLPQ9Y342 182 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 DOCK1Q14185 1865 aa18.74■□□□□ 0.59
SCARB1-203ENST00000415380 SNRPAP09012 282 aaKnown RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 MXRA7P84157 204 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 THOC5Q13769 683 aaKnown RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 FAM102AQ5T9C2 384 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 CES4AQ5XG92 561 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 CYP4V2Q6ZWL3 525 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 C12orf42Q96LP6 360 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 VPS33BQ9H267 617 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 USP29Q9HBJ7 922 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 KCNK4Q9NYG8 393 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 I3L4J1 428 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 B4GALT4O60513 344 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 KRT37O76014 449 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 GABRB2P47870 512 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 MRPS5P82675 430 aaKnown RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 BST1Q10588 318 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 ZNF667Q5HYK9 610 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 CATSPERGQ6ZRH7 1159 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 CDR2LQ86X02 465 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-203ENST00000415380 TREML1Q86YW5 311 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 ZBTB8OSQ8IWT0 167 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 SMYD3Q9H7B4 428 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 PLAC1Q9HBJ0 212 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 POPDC2Q9HBU9 364 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 PICK1Q9NRD5 415 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 AFG3L2Q9Y4W6 797 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 CAPN14A8MX76 684 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 NPTXRO95502 500 aa18.73■□□□□ 0.59
SCARB1-203ENST00000415380 PTPN11Q06124 597 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms