RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 GAS7O60861 476 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 SNAI1O95863 264 aaPredicted RBP21.22■□□□□ 0.99
AP1S3-205ENST00000415298 STT3AP46977 705 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 RPL26P61254 145 aaKnown RBP21.22■□□□□ 0.99
AP1S3-205ENST00000415298 ZNF507Q8TCN5 953 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 SCFD2Q8WU76 684 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 PEX13Q92968 403 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 NDFIP2Q9NV92 336 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 SLC38A7Q9NVC3 462 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 PLK2Q9NYY3 685 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 RWDD2AQ9UIY3 292 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 MAD1L1Q9Y6D9 718 aa21.22■□□□□ 0.99
AP1S3-205ENST00000415298 MGAMO43451 1857 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 CCDC22O60826 627 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 DDHD2O94830 711 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 HAUS5O94927 633 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 ARIH2O95376 493 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 IFNA8P32881 189 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 RNASE9P60153 205 aaKnown RBP21.21■□□□□ 0.99
AP1S3-205ENST00000415298 TUBA3EQ6PEY2 450 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 NLRX1Q86UT6 975 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 PDSS2Q86YH6 399 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 LURAP1LQ8IV03 231 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SMYD4Q8IYR2 804 aaPredicted RBP21.21■□□□□ 0.99
AP1S3-205ENST00000415298 ATL1Q8WXF7 558 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SDCCAG3Q96C92 435 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 GPRASP2Q96D09 838 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 FMO2Q99518 471 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 NDE1Q9NXR1 346 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 PCDHGA11Q9Y5H2 935 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SPATA31C2B4DYI2 1134 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 ICMTO60725 284 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SNX2O60749 519 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 TSPAN9O75954 239 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 GAS8O95995 478 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SP4Q02446 784 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 PDK3Q15120 406 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 LY6KQ17RY6 165 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 PRAMEF19Q5SWL8 479 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 BTBD8Q5XKL5 378 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 UGT2A3Q6UWM9 527 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 CCBE1Q6UXH8 406 aaPredicted RBP21.21■□□□□ 0.99
AP1S3-205ENST00000415298 NET1Q7Z628 596 aaPredicted RBP21.21■□□□□ 0.99
AP1S3-205ENST00000415298 RASSF3Q86WH2 238 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 OR6Y1Q8NGX8 325 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 CDHR1Q96JP9 859 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 SHCBP1LQ9BZQ2 653 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 MAN1C1Q9NR34 630 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 PCDHGA3Q9Y5H0 932 aa21.21■□□□□ 0.99
AP1S3-205ENST00000415298 POTEHQ6S545 545 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 SLC51BQ86UW2 128 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 SPARTQ8N0X7 666 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 FBXL18Q96ME1 805 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 BTBD10Q9BSF8 475 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 CES2O00748 559 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 GSC2O15499 205 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 MYCP01106 439 aaPredicted RBP21.2■□□□□ 0.98
AP1S3-205ENST00000415298 NIPAL4Q0D2K0 466 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 DCAF6Q58WW2 860 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 TJAP1Q5JTD0 557 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 ZNF410Q86VK4 478 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 CD99L2Q8TCZ2 262 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 CHPT1Q8WUD6 406 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 SGF29Q96ES7 293 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 TINF2Q9BSI4 451 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 CFHR5Q9BXR6 569 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 PITPNM3Q9BZ71 974 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 LRRC37A2A6NM11 1700 aa21.2■□□□□ 0.98
AP1S3-205ENST00000415298 TMEM120BA0PK00 339 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 ASB14A6NK59 587 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 GPR25O00155 361 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 ALOX15BO15296 676 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 FCGRTP55899 365 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 DPYDQ12882 1025 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 THOC5Q13769 683 aaKnown RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 RAVER1Q8IY67 606 aaKnown RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 U2AF1L4Q8WU68 220 aaKnown RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 BORCS5Q969J3 196 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 MAGEB18Q96M61 343 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 MRPS26Q9BYN8 205 aaKnown RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 NT5C3AQ9H0P0 336 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 DDX47Q9H0S4 455 aaKnown RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 IFT122Q9HBG6 1241 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 CTRB1P17538 263 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 FLT3LGP49771 235 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 B2MP61769 119 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 PRKCZQ05513 592 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 CD300CQ08708 224 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 HERC4Q5GLZ8 1057 aaPredicted RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 CTRB2Q6GPI1 263 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 B3GNT9Q6UX72 402 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 TMC7Q7Z402 723 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 SAMD14Q8IZD0 417 aaPredicted RBP21.19■□□□□ 0.98
AP1S3-205ENST00000415298 ACTRT2Q8TDY3 377 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 SNX29Q8TEQ0 813 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 STAMQ92783 540 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 AK8Q96MA6 479 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 TEKT3Q9BXF9 490 aa21.19■□□□□ 0.98
AP1S3-205ENST00000415298 CENPBD1B2RD01 187 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms