RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 C6orf89Q6UWU4 347 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 SPOCD1Q6ZMY3 1216 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 RTN4RL1Q86UN2 441 aaPredicted RBP15.53■□□□□ 0.08
USP4-203ENST00000415188 RIBC1Q8N443 379 aaPredicted RBP15.53■□□□□ 0.08
USP4-203ENST00000415188 EPS8L3Q8TE67 593 aaKnown RBP15.53■□□□□ 0.08
USP4-203ENST00000415188 NLRP4Q96MN2 994 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 SAMD11Q96NU1 681 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 SELENOSQ9BQE4 189 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 CCDC77Q9BR77 488 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 INO80BQ9C086 356 aaPredicted RBP15.53■□□□□ 0.08
USP4-203ENST00000415188 RC3H2Q9HBD1 1191 aaKnown RBP15.53■□□□□ 0.08
USP4-203ENST00000415188 LGALS13Q9UHV8 139 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 PADI3Q9ULW8 664 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 EVPLQ92817 2033 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 SIGLEC16A6NMB1 481 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 RPLP2P05387 115 aaKnown RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 WEE2P0C1S8 567 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 LINC00271P0C7V0 271 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 CD58P19256 250 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 DRD4P21917 467 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 ZNF252P-AS1Q0IIN9 211 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 ACAP1Q15027 740 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 SKIDA1Q1XH10 827 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 GKAP1Q5VSY0 366 aaPredicted RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 IZUMO3Q5VZ72 239 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 EEF1DP3Q658K8 133 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 HIBCHQ6NVY1 386 aaPredicted RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 NT5DC4Q86YG4 428 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 THNSL1Q8IYQ7 743 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 KIAA0319LQ8IZA0 1049 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 CACNA2D3Q8IZS8 1091 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 FIBCD1Q8N539 461 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 ZCCHC9Q8N567 271 aaKnown RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 NKD2Q969F2 451 aaPredicted RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 TTC25Q96NG3 672 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 MCEEQ96PE7 176 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 PPP1R16BQ96T49 567 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 HEMGNQ9BXL5 484 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 NSRP1Q9H0G5 558 aaKnown RBP15.52■□□□□ 0.08
USP4-203ENST00000415188 ADAM7Q9H2U9 754 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 ASB7Q9H672 318 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 CDHR5Q9HBB8 845 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 LRRC4CQ9HCJ2 640 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 GINS2Q9Y248 185 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.08
USP4-203ENST00000415188 hCG_1818297A0A087WSY0 165 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 H3BNC9 293 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 FSBPO95073 299 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 STAU1O95793 577 aaKnown RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 KRT7P08729 469 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 CHN1P15882 459 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 CTNNB1P35222 781 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 CHKAP35790 457 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 VCPP55072 806 aaKnown RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 RPL7AP62424 266 aaKnown RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 ZNF268Q14587 947 aaPredicted RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 STAT4Q14765 748 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 TFDP3Q5H9I0 405 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 LINC01465Q8N7H1 131 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 TTC13Q8NBP0 860 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 TFAP2BQ92481 460 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 MRPL38Q96DV4 380 aaKnown RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 PHACTR1Q9C0D0 580 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 MIS12Q9H081 205 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 PPCSQ9HAB8 311 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 INTS9Q9NV88 658 aaKnown RBP15.52■□□□□ 0.07
USP4-203ENST00000415188 NINJ2Q9NZG7 142 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 ACTL7BQ9Y614 415 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 SQORQ9Y6N5 450 aa15.52■□□□□ 0.07
USP4-203ENST00000415188 O00370 1275 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 DNALI1O14645 258 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 ITGAVP06756 1048 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 IBSPP21815 317 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 SSTR3P32745 418 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 RDXP35241 583 aaKnown RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 GJC1P36383 396 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 IFI35P80217 286 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 HADHQ16836 314 aaKnown RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 KCTD19Q17RG1 926 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 TTC31Q49AM3 519 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 MFSD7Q6UXD7 560 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 GSTA5Q7RTV2 222 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 CPLX4Q7Z7G2 160 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 TAX1BP1Q86VP1 789 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 NME8Q8N427 588 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 WDTC1Q8N5D0 677 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 ALLCQ8N6M5 410 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 ZNF689Q96CS4 500 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 SEC16BQ96JE7 1060 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 DDX23Q9BUQ8 820 aaKnown RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 UBE2ZQ9H832 354 aaPredicted RBP15.51■□□□□ 0.07
USP4-203ENST00000415188 SIX4Q9UIU6 781 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 NCOR1O75376 2440 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 TTC3P53804 2025 aa15.51■□□□□ 0.07
USP4-203ENST00000415188 NLRC5Q86WI3 1866 aa15.5■□□□□ 0.07
USP4-203ENST00000415188 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
USP4-203ENST00000415188 DGKIO75912 1065 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms