RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 PAXBP1Q9Y5B6 917 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 PCDHGC5Q9Y5F6 944 aa14.98□□□□□ -0.01
SF3B1-204ENST00000414963 MACROD2A1Z1Q3 448 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 PIK3R2O00459 728 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 KIF5CO60282 957 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 CLASP2O75122 1294 aaKnown RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 GLUD1P00367 558 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 CA8P35219 290 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 NOP2P46087 812 aaKnown RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 ALDH1A3P47895 512 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 GPR15P49685 360 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 DAOAP59103 153 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 PLD1Q13393 1074 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 CCDC149Q6ZUS6 474 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 NYAP1Q6ZVC0 841 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 BEND5Q7L4P6 421 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 BHLHA9Q7RTU4 235 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 SLFN11Q7Z7L1 901 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 KREMEN2Q8NCW0 462 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 SCAMP5Q8TAC9 235 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 ZNF564Q8TBZ8 553 aaPredicted RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 FNIP1Q8TF40 1166 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 MRPL38Q96DV4 380 aaKnown RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 MYRFLQ96LU7 910 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 SELENOOQ9BVL4 669 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 TTLL2Q9BWV7 592 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 PLEKHA4Q9H4M7 779 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 OSGEPQ9NPF4 335 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 EHD2Q9NZN4 543 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 CHORDC1Q9UHD1 332 aaPredicted RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
SF3B1-204ENST00000414963 YIPF1Q9Y548 306 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 INSL5Q9Y5Q6 135 aa14.97□□□□□ -0.01
SF3B1-204ENST00000414963 CHD7Q9P2D1 2997 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 SLC38A8A6NNN8 435 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 PRRG1O14668 218 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 SOAT2O75908 522 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 TUBB4AP04350 444 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 USP17L7P0C7H9 530 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 RFC1P35251 1148 aaPredicted RBP14.96□□□□□ -0.01
SF3B1-204ENST00000414963 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.01
SF3B1-204ENST00000414963 YWHAZP63104 245 aaKnown RBP14.96□□□□□ -0.01
SF3B1-204ENST00000414963 PTPROQ16827 1216 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 FAM102AQ5T9C2 384 aaPredicted RBP14.96□□□□□ -0.01
SF3B1-204ENST00000414963 SDHAF4Q5VUM1 108 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 DCUN1D2Q6PH85 259 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 DENND5BQ6ZUT9 1274 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 LRRC57Q8N9N7 239 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 TRIM58Q8NG06 486 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 GDPD5Q8WTR4 605 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 ZNF576Q9H609 170 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 ASB3Q9Y575 518 aa14.96□□□□□ -0.01
SF3B1-204ENST00000414963 GRID2IPA4D2P6 1211 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 C2CD4BA6NLJ0 364 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 MYO1FO00160 1098 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 BUB1O43683 1085 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 HSF2BPO75031 334 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 MOCS3O95396 460 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 CSH1P0DML2 217 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 CSH2P0DML3 217 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 YWHAQP27348 245 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 EPHB3P54753 998 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 USP46P62068 366 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 TAF5Q15542 800 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 C11orf63Q6NUN7 778 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 MON1AQ86VX9 555 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 NIPA2Q8N8Q9 360 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 JOSD2Q8TAC2 188 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 CLEC4CQ8WTT0 213 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 TRMT2BQ96GJ1 504 aaKnown RBP14.95□□□□□ -0.02
SF3B1-204ENST00000414963 PIWIL1Q96J94 861 aaKnown RBP14.95□□□□□ -0.02
SF3B1-204ENST00000414963 SLC2A13Q96QE2 648 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 CDCA3Q99618 268 aaPredicted RBP14.95□□□□□ -0.02
SF3B1-204ENST00000414963 TRIM62Q9BVG3 475 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 IRX2Q9BZI1 471 aaPredicted RBP14.95□□□□□ -0.02
SF3B1-204ENST00000414963 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
SF3B1-204ENST00000414963 LMCD1Q9NZU5 365 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 IP6K2Q9UHH9 426 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 DPP7Q9UHL4 492 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
SF3B1-204ENST00000414963 YJEFN3A6XGL0 299 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 E7ENQ6 273 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 DPYSL4O14531 572 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 BUB1BO60566 1050 aaPredicted RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 PAPLNO95428 1278 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 GJB6O95452 261 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 POU2F2P09086 479 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 SPATA31D3P0C874 917 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 HMGA1P17096 107 aaKnown RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 HOXA9P31269 272 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 MAN1A1P33908 653 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 ZNF143P52747 638 aaPredicted RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 NAP1L1P55209 391 aaKnown RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 ETF1P62495 437 aaKnown RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 TWF1Q12792 350 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 PIGHQ14442 188 aaPredicted RBP14.94□□□□□ -0.02
SF3B1-204ENST00000414963 VEPH1Q14D04 833 aa14.94□□□□□ -0.02
SF3B1-204ENST00000414963 ACAP1Q15027 740 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms