RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CETN1Q12798 172 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 RUNX3Q13761 415 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 DPCR1Q3MIW9 517 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 TXNDC11Q6PKC3 985 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 RALGPS2Q86X27 583 aaPredicted RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 C1orf210Q8IVY1 113 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 FBXO44Q9H4M3 255 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 SPATA6Q9NWH7 488 aaPredicted RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 DUS2Q9NX74 493 aaKnown RBP15.66■□□□□ 0.1
LIMS4-201ENST00000413601 WNT6Q9Y6F9 365 aa15.66■□□□□ 0.1
LIMS4-201ENST00000413601 LEFTY2O00292 366 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 COCHO43405 550 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 TCF3P15923 654 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 ACO1P21399 889 aaKnown RBP15.65■□□□□ 0.1
LIMS4-201ENST00000413601 RPS9P46781 194 aaKnown RBP15.65■□□□□ 0.1
LIMS4-201ENST00000413601 SLC7A9P82251 487 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 PON2Q15165 354 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 PDGFRLQ15198 375 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 HECTD3Q5T447 861 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 SNX30Q5VWJ9 437 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 IRF2BP1Q8IU81 584 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 UBR7Q8N806 425 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 GPT2Q8TD30 523 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 MSANTD3Q96H12 275 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 LINC00597Q9H2U6 94 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 CCSER2Q9H7U1 834 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 LMAN1LQ9HAT1 526 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 SMPD4Q9NXE4 827 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 CPQQ9Y646 472 aa15.65■□□□□ 0.1
LIMS4-201ENST00000413601 KIAA1549LQ6ZVL6 1849 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 CYP26A1O43174 497 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 ZDHHC11BP0C7U3 371 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 MBL2P11226 248 aaPredicted RBP15.64■□□□□ 0.09
LIMS4-201ENST00000413601 CHRNB1P11230 501 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 CD19P15391 556 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 MAGEA9P43362 315 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 IFNAR2P48551 515 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 ARHGAP17Q68EM7 881 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 C1orf228Q6PIY5 440 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 RRAGAQ7L523 313 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 ARHGEF19Q8IW93 802 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 KAT5Q92993 513 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 PNPLA8Q9NP80 782 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 TLR8Q9NR97 1041 aaKnown RBP15.64■□□□□ 0.09
LIMS4-201ENST00000413601 SCML2Q9UQR0 700 aa15.64■□□□□ 0.09
LIMS4-201ENST00000413601 SCAMP3O14828 347 aaKnown RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 KIF11P52732 1056 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 MTAPQ13126 283 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 TPD52L1Q16890 204 aaPredicted RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 GOLGA7BQ2TAP0 167 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 EML3Q32P44 896 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 TMEM270Q6UE05 265 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 ALYREFQ86V81 257 aaKnown RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 TTC30AQ86WT1 665 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 MAML2Q8IZL2 1156 aaPredicted RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 ATP2A3Q93084 1043 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 CHFRQ96EP1 664 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 INTS2Q9H0H0 1204 aaKnown RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 ECT2Q9H8V3 914 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 RBM12Q9NTZ6 932 aaKnown RBP15.63■□□□□ 0.09
LIMS4-201ENST00000413601 OSER1Q9NX31 292 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 CFAP97Q9P2B7 532 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 PCDHB4Q9Y5E5 795 aa15.63■□□□□ 0.09
LIMS4-201ENST00000413601 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 RNF225M0QZC1 329 aaPredicted RBP15.62■□□□□ 0.09
LIMS4-201ENST00000413601 LAMTOR5O43504 91 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 TLR5O60602 858 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 VDRP11473 427 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 MRE11P49959 708 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 TUBP50607 506 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 CPA6Q8N4T0 437 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 ZFRQ96KR1 1074 aaKnown RBP15.62■□□□□ 0.09
LIMS4-201ENST00000413601 CRACR2AQ9BSW2 395 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 NACA2Q9H009 215 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 CHRDQ9H2X0 955 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 NMUR1Q9HB89 426 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 DACH1Q9UI36 760 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 TSPAN16Q9UKR8 245 aa15.62■□□□□ 0.09
LIMS4-201ENST00000413601 TULP2O00295 520 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 TBX18O95935 607 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 CALCAP01258 141 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 SP9P0CG40 484 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 ERCC5P28715 1186 aaPredicted RBP15.61■□□□□ 0.09
LIMS4-201ENST00000413601 GJA4P35212 333 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 NBL1P41271 181 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 MTIF2P46199 727 aaKnown RBP15.61■□□□□ 0.09
LIMS4-201ENST00000413601 GCNT1Q02742 428 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 PDE4CQ08493 712 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 LRRC32Q14392 662 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 HSP90AA4PQ58FG1 418 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 NAIF1Q69YI7 327 aaPredicted RBP15.61■□□□□ 0.09
LIMS4-201ENST00000413601 CCDC186Q7Z3E2 898 aa15.61■□□□□ 0.09
LIMS4-201ENST00000413601 PIGZQ86VD9 579 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms