RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM105Q8N8V8 129 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 ANKRD20A12PQ8NF67 263 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 LMO3Q8TAP4 145 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 FEZF2Q8TBJ5 459 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 ENOX1Q8TC92 643 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 SLC2A14Q8TDB8 520 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 WHAMMQ8TF30 809 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 IRGQQ8WZA9 623 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 SEMA4DQ92854 862 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 HSFY1Q96LI6 401 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 KCNK16Q96T55 309 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 ZNF518BQ9C0D4 1074 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 NAT10Q9H0A0 1025 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 SDCBP2Q9H190 292 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 APOBEC3GQ9HC16 384 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 CNGB3Q9NQW8 809 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.75□□□□□ -1.332e-6■■■■■ 149.1
USP54-202ENST00000413442 HEBP1Q9NRV9 189 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 ANO10Q9NW15 660 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 DUS2Q9NX74 493 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 PIAS3Q9Y6X2 628 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 KIF26AQ9ULI4 1882 aaPredicted RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 TRIM49BA6NDI0 452 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 LRRC10BA6NIK2 292 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CHURC1-FNTBB4DL54 471 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 SPECC1L-ADORA2AF8WAN1 911 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 BIN1O00499 593 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 XPO1O14980 1071 aaKnown RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 NPC1O15118 1278 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 PI15O43692 258 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 FBXO21O94952 628 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CHRNB1P11230 501 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CTHP32929 405 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 TNFRSF4P43489 277 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CXCL12P48061 93 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ZNF132P52740 706 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 SLC5A3P53794 718 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 MAP3K7CLP57077 242 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CYP4F8P98187 520 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 NHLH1Q02575 133 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 GAD2Q05329 585 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 BST2Q10589 180 aaKnown RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 USP4Q13107 963 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 FZD5Q13467 585 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 UBXN2BQ14CS0 331 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ANGPT1Q15389 498 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ZNF77Q15935 545 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CAMK4Q16566 473 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 MAN2A1Q16706 1144 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 EXOC3L4Q17RC7 722 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CBWD6Q4V339 395 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 TMEM196Q5HYL7 178 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CBWD3Q5JTY5 395 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CBWD5Q5RIA9 395 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 PPP1R26Q5T8A7 1209 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 ACBD5Q5T8D3 534 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ISM2Q6H9L7 571 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ZNF687Q8N1G0 1237 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 TMEM130Q8N3G9 435 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 PPM1KQ8N3J5 372 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CAMKK1Q8N5S9 505 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ARL14EPQ8N8R7 260 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 ZNF557Q8N988 423 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 SLC4A11Q8NBS3 891 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 SH3RF2Q8TEC5 729 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 NELL1Q92832 810 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ATOH1Q92858 354 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 TATDN2Q93075 761 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 AZIN2Q96A70 460 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 SMOQ99835 787 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 NACA2Q9H009 215 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 MIS12Q9H081 205 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 DPEP3Q9H4B8 488 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 MMRN2Q9H8L6 949 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ECT2Q9H8V3 914 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 LMAN1LQ9HAT1 526 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 LRRC4Q9HBW1 653 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 ABCC13Q9NSE7 274 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 WDR35Q9P2L0 1181 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 CHORDC1Q9UHD1 332 aaPredicted RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 DNMT3LQ9UJW3 386 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 LSM7Q9UK45 103 aaKnown RBP6.74□□□□□ -1.33
USP54-202ENST00000413442 SH3BP1Q9Y3L3 701 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 NME7Q9Y5B8 376 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 PCDHGA2Q9Y5H1 932 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 VCANP13611 3396 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 TICRRQ7Z2Z1 1910 aa6.74□□□□□ -1.33
USP54-202ENST00000413442 PATJQ8NI35 1801 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 FANCMQ8IYD8 2048 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 HHLA1C9JL84 531 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 LEFTY2O00292 366 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 CLDN5O00501 218 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 TLR5O60602 858 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 PRAMEF12O95522 483 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 LATS1O95835 1130 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 ZBED1O96006 694 aa6.73□□□□□ -1.33
USP54-202ENST00000413442 ADH1CP00326 375 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms