RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FAM124BQ9H5Z6 455 aaPredicted RBP18.05■□□□□ 0.48
PTPRC-206ENST00000413409 VRTNQ9H8Y1 702 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 ARHGEF3Q9NR81 526 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRC-206ENST00000413409 LCMT1Q9UIC8 334 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 SCINQ9Y6U3 715 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 ASPMQ8IZT6 3477 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 SPTLC1O15269 473 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 THAP12O43422 761 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 SPOPO43791 374 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ZMYND10O75800 440 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 CST3P01034 146 aaPredicted RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 FGGP02679 453 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ARF4P18085 180 aaPredicted RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ATICP31939 592 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 GBP2P32456 591 aaPredicted RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 SLC1A1P43005 524 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ASPAP45381 313 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ALDH7A1P49419 539 aaKnown RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 PEX5P50542 639 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 CLCN4P51793 760 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 SLC7A5Q01650 507 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF528Q3MIS6 628 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 SEL1L2Q5TEA6 688 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 DDX53Q86TM3 631 aaKnown RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
PTPRC-206ENST00000413409 MED4Q9NPJ6 270 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 EPS15L1Q9UBC2 864 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 C2CD2Q9Y426 696 aa18.04■□□□□ 0.48
PTPRC-206ENST00000413409 COL4A3Q01955 1670 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 TMEM110-MUSTN1A8MSY1 372 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 ERLIN2O94905 339 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 STAU1O95793 577 aaKnown RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 GLI1P08151 1106 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 OAS2P29728 719 aaKnown RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CDH5P33151 784 aaPredicted RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CUL1Q13616 776 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 PPM1JQ5JR12 505 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 DCLRE1AQ6PJP8 1040 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 MAATS1Q7Z4T9 603 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CD302Q8IX05 232 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 KLHL7Q8IXQ5 586 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 GSPT2Q8IYD1 628 aaKnown RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 ST13P5Q8NFI4 369 aaPredicted RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CCDC26Q8TAB7 109 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 KRT35Q92764 455 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 SCLT1Q96NL6 688 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 KLHL5Q96PQ7 755 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 BCO2Q9BYV7 579 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF518BQ9C0D4 1074 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 MRPL47Q9HD33 250 aaKnown RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 CISHQ9NSE2 258 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 SIX4Q9UIU6 781 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 ANAPC7Q9UJX3 599 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 PCDHGC3Q9UN70 934 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 SMG5Q9UPR3 1016 aaKnown RBP18.03■□□□□ 0.48
PTPRC-206ENST00000413409 PCDHA3Q9Y5H8 950 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 DOCK8Q8NF50 2099 aa18.03■□□□□ 0.48
PTPRC-206ENST00000413409 A0A1B0GUA9 196 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 LACTBL1A8MY62 500 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 SART1O43290 800 aaKnown RBP18.02■□□□□ 0.48
PTPRC-206ENST00000413409 CALCAP01258 141 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 NFICP08651 508 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 RRM1P23921 792 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 MAN1A1P33908 653 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 GRM5P41594 1212 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 RNASE9P60153 205 aaKnown RBP18.02■□□□□ 0.48
PTPRC-206ENST00000413409 GUCY2DQ02846 1103 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 PLEKHA7Q6IQ23 1121 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 MREGQ8N565 214 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 WHAMMQ8TF30 809 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF606Q8WXB4 792 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 IGSF21Q96ID5 467 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 AP1M1Q9BXS5 423 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 ADAMTS10Q9H324 1103 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 CYP3A43Q9HB55 503 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 WDR6Q9NNW5 1121 aaKnown RBP18.02■□□□□ 0.48
PTPRC-206ENST00000413409 ADAM22Q9P0K1 906 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 USP18Q9UMW8 372 aa18.02■□□□□ 0.48
PTPRC-206ENST00000413409 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CALB1P05937 261 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 PAEPP09466 180 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CNPP09543 421 aaKnown RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 RWDD2BP57060 319 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 STARD6P59095 220 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 OSTNP61366 133 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CSTF1Q05048 431 aaKnown RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 PTP4A2Q12974 167 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 TMEM132DQ14C87 1099 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 ZNF667Q5HYK9 610 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 JADE1Q6IE81 842 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 SND1Q7KZF4 910 aaKnown RBP eCLIP18.01■□□□□ 0.472e-7■□□□□ 9.2
PTPRC-206ENST00000413409 CDR2LQ86X02 465 aaPredicted RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 ZBTB44Q8NCP5 570 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CXorf38Q8TB03 319 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 FAM71BQ8TC56 605 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms