RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MTAPQ13126 283 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 NR1H3Q13133 447 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 CUL2Q13617 745 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 PON2Q15165 354 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 HECTD3Q5T447 861 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 SNX30Q5VWJ9 437 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 TXNDC11Q6PKC3 985 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 CLEC20AQ6ZU45 233 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 SYNPOQ8N3V7 929 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 ECT2Q9H8V3 914 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 TLR8Q9NR97 1041 aaKnown RBP16.6■□□□□ 0.25
MCF2L-211ENST00000413354 CPQQ9Y646 472 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 FAM186AA6NE01 2351 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 LEFTY2O00292 366 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 MBL2P11226 248 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 ARSAP15289 507 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 SLC8A3P57103 927 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 CSTF1Q05048 431 aaKnown RBP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 GRSF1Q12849 480 aaKnown RBP eCLIP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 EML3Q32P44 896 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 ZNF394Q53GI3 561 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 TATDN2Q93075 761 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 TMEM176AQ96HP8 235 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 HEXIM2Q96MH2 286 aaKnown RBP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-211ENST00000413354 GMIPQ9P107 970 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
MCF2L-211ENST00000413354 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.25
MCF2L-211ENST00000413354 PRR23AA6NEV1 266 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 TRDMT1O14717 391 aaKnown RBP16.58■□□□□ 0.24
MCF2L-211ENST00000413354 BEST1O76090 585 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 ZDHHC11BP0C7U3 371 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 CCDC192P0DO97 292 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.24
MCF2L-211ENST00000413354 STX17P56962 302 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 CCINQ13939 588 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 CAMK4Q16566 473 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 PPP1R26Q5T8A7 1209 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-211ENST00000413354 ARHGAP17Q68EM7 881 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 SPEM1Q8N4L4 309 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 SLC4A11Q8NBS3 891 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 JAKMIP2Q96AA8 810 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 ARID3AQ99856 593 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 DUSP16Q9BY84 665 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 NACA2Q9H009 215 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 RNF38Q9H0F5 515 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 SCML2Q9UQR0 700 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 PCDHGA2Q9Y5H1 932 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 ATG2BQ96BY7 2078 aa16.58■□□□□ 0.24
MCF2L-211ENST00000413354 COCHO43405 550 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 GJA4P35212 333 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 RAD23BP54727 409 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 NRLP54845 237 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 TMEM196Q5HYL7 178 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 P2RY13Q9BPV8 354 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 ZSCAN32Q9NX65 697 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 SMPD4Q9NXE4 827 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 CFAP97Q9P2B7 532 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 TBC1D14Q9P2M4 693 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 CHORDC1Q9UHD1 332 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-211ENST00000413354 RWDD2AQ9UIY3 292 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.57■□□□□ 0.24
MCF2L-211ENST00000413354 R4GN57 208 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 MYOFQ9NZM1 2061 aa16.57■□□□□ 0.24
MCF2L-211ENST00000413354 PTPRZ1P23471 2315 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 OTOL1A6NHN0 477 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 HHLA1C9JL84 531 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 TLR5O60602 858 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 ACO1P21399 889 aaKnown RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 DRD1P21728 446 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 CXCL12P48061 93 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 PSEN1P49768 467 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 ZXDBP98169 803 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 FBXO43Q4G163 708 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 CLEC17AQ6ZS10 378 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 GPRIN1Q7Z2K8 1008 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 TADA2BQ86TJ2 420 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 TRIM59Q8IWR1 403 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 MLKLQ8NB16 471 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 ATRIPQ8WXE1 791 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 OTUB2Q96DC9 234 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 SRRTQ9BXP5 876 aaKnown RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 CCSER2Q9H7U1 834 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 RBM12Q9NTZ6 932 aaKnown RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 ZFHX2Q9C0A1 2572 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-211ENST00000413354 KIAA1549LQ6ZVL6 1849 aa16.56■□□□□ 0.24
MCF2L-211ENST00000413354 E2F8A0AVK6 867 aa16.55■□□□□ 0.24
MCF2L-211ENST00000413354 CYP26A1O43174 497 aa16.55■□□□□ 0.24
MCF2L-211ENST00000413354 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-211ENST00000413354 LMNAP02545 664 aaKnown RBP16.55■□□□□ 0.24
MCF2L-211ENST00000413354 AFPP02771 609 aaKnown RBP16.55■□□□□ 0.24
MCF2L-211ENST00000413354 KIF11P52732 1056 aa16.55■□□□□ 0.24
MCF2L-211ENST00000413354 BCAT1P54687 386 aa16.55■□□□□ 0.24
MCF2L-211ENST00000413354 KCNH2Q12809 1159 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms