RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FBXO44Q9H4M3 255 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 FAM86C1Q9NVL1 165 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 CPQQ9Y646 472 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 LEFTY2O00292 366 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 NCAM2O15394 837 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 ZDHHC11BP0C7U3 371 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 ARSAP15289 507 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 TCF3P15923 654 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 ACO1P21399 889 aaKnown RBP19.9■□□□□ 0.78
TRIM56-202ENST00000412507 CTHP32929 405 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 PGFP49763 221 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 RUNX3Q13761 415 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 TXNDC11Q6PKC3 985 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 RRAGAQ7L523 313 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 RALGPS2Q86X27 583 aaPredicted RBP19.9■□□□□ 0.78
TRIM56-202ENST00000412507 ZNF687Q8N1G0 1237 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 ATOH1Q92858 354 aaPredicted RBP19.9■□□□□ 0.78
TRIM56-202ENST00000412507 CLDN23Q96B33 292 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 MSANTD3Q96H12 275 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 CCSER2Q9H7U1 834 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 PNPLA8Q9NP80 782 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 DUS2Q9NX74 493 aaKnown RBP19.9■□□□□ 0.78
TRIM56-202ENST00000412507 PCDHB4Q9Y5E5 795 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 WNT6Q9Y6F9 365 aa19.9■□□□□ 0.78
TRIM56-202ENST00000412507 OTOL1A6NHN0 477 aaPredicted RBP19.89■□□□□ 0.77
TRIM56-202ENST00000412507 MBL2P11226 248 aaPredicted RBP19.89■□□□□ 0.77
TRIM56-202ENST00000412507 CD19P15391 556 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 PDGFRLQ15198 375 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 SGO2Q562F6 1265 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 HECTD3Q5T447 861 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 SNX30Q5VWJ9 437 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 TMEM270Q6UE05 265 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 OSCP1Q8WVF1 389 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 PHOX2BQ99453 314 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 INTS2Q9H0H0 1204 aaKnown RBP19.89■□□□□ 0.77
TRIM56-202ENST00000412507 IRF2BPLQ9H1B7 796 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 SMPD4Q9NXE4 827 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 DACH1Q9UI36 760 aa19.89■□□□□ 0.77
TRIM56-202ENST00000412507 CYP26A1O43174 497 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 COCHO43405 550 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 ERCC5P28715 1186 aaPredicted RBP19.88■□□□□ 0.77
TRIM56-202ENST00000412507 MTIF2P46199 727 aaKnown RBP19.88■□□□□ 0.77
TRIM56-202ENST00000412507 IFNAR2P48551 515 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 KIF11P52732 1056 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 PON2Q15165 354 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 GOLGA7BQ2TAP0 167 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 TTC30AQ86WT1 665 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 C1orf210Q8IVY1 113 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 ANKRD52Q8NB46 1076 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 CRACR2AQ9BSW2 395 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 LINC00597Q9H2U6 94 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 THAP9Q9H5L6 903 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 LMAN1LQ9HAT1 526 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 TLR8Q9NR97 1041 aaKnown RBP19.88■□□□□ 0.77
TRIM56-202ENST00000412507 SPATA6Q9NWH7 488 aaPredicted RBP19.88■□□□□ 0.77
TRIM56-202ENST00000412507 TSPAN16Q9UKR8 245 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 SCML2Q9UQR0 700 aa19.88■□□□□ 0.77
TRIM56-202ENST00000412507 RNF225M0QZC1 329 aaPredicted RBP19.87■□□□□ 0.77
TRIM56-202ENST00000412507 VDRP11473 427 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 MAGEA9P43362 315 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 RPS9P46781 194 aaKnown RBP19.87■□□□□ 0.77
TRIM56-202ENST00000412507 GCNT1Q02742 428 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 EML3Q32P44 896 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 HSP90AA4PQ58FG1 418 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 C1orf228Q6PIY5 440 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 KREMEN1Q96MU8 473 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 ECT2Q9H8V3 914 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 NMUR1Q9HB89 426 aa19.87■□□□□ 0.77
TRIM56-202ENST00000412507 TULP2O00295 520 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 SCAMP3O14828 347 aaKnown RBP19.86■□□□□ 0.77
TRIM56-202ENST00000412507 TLR5O60602 858 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 CHRNB1P11230 501 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 TUBP50607 506 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 RBM43Q6ZSC3 357 aaKnown RBP19.86■□□□□ 0.77
TRIM56-202ENST00000412507 PIGZQ86VD9 579 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 CPA6Q8N4T0 437 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 ATP2A3Q93084 1043 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 CHFRQ96EP1 664 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 UBXN6Q9BZV1 441 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 RBM12Q9NTZ6 932 aaKnown RBP19.86■□□□□ 0.77
TRIM56-202ENST00000412507 OSER1Q9NX31 292 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 CFAP97Q9P2B7 532 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 HESX1Q9UBX0 185 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 KIAA1257Q9ULG3 409 aa19.86■□□□□ 0.77
TRIM56-202ENST00000412507 MYO18AQ92614 2054 aaKnown RBP19.85■□□□□ 0.77
TRIM56-202ENST00000412507 A0A1W2PQH9 124 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 O00370 1275 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 CALCAP01258 141 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 PAEPP09466 180 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 SLC9A1P19634 815 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 GJA4P35212 333 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 BCAT1P54687 386 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 SLC8A3P57103 927 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 PDE4CQ08493 712 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 GBP6Q6ZN66 633 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 DDX42Q86XP3 938 aaKnown RBP eCLIP19.85■□□□□ 0.77
TRIM56-202ENST00000412507 FAM114A1Q8IWE2 563 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 RBBP8NLQ8NC74 664 aaPredicted RBP19.85■□□□□ 0.77
TRIM56-202ENST00000412507 UBA3Q8TBC4 463 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 TFAP2BQ92481 460 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms