RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FMO5P49326 533 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 LRMPQ12912 555 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 SNX30Q5VWJ9 437 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 FSTL4Q6MZW2 842 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 PKN3Q6P5Z2 889 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 ECT2Q9H8V3 914 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 OSER1Q9NX31 292 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 KIAA1468Q9P260 1216 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 FBXO4Q9UKT5 387 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 PIEZO1Q92508 2521 aa20.17■□□□□ 0.82
SF3A1-202ENST00000411423 PFKLP17858 780 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 GJA4P35212 333 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 PPP1R2P41236 205 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 SATB1Q01826 763 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 PAK1Q13153 545 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 PDGFRLQ15198 375 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 GAB4Q2WGN9 574 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 CCDC40Q4G0X9 1142 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 CC2D1AQ6P1N0 951 aaPredicted RBP20.16■□□□□ 0.82
SF3A1-202ENST00000411423 FOXR2Q6PJQ5 311 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 CCDC150Q8NCX0 1101 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 LMO3Q8TAP4 145 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 OVCA2Q8WZ82 227 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 EZH1Q92800 747 aaPredicted RBP20.16■□□□□ 0.82
SF3A1-202ENST00000411423 NELL1Q92832 810 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 TMEM176AQ96HP8 235 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 FAXDC2Q96IV6 333 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 NMUR1Q9HB89 426 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 MYO16Q9Y6X6 1858 aa20.16■□□□□ 0.82
SF3A1-202ENST00000411423 ANTXRLA6NF34 631 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 CYP26A1O43174 497 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 IFNAR2P48551 515 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 CUL2Q13617 745 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 TRIM59Q8IWR1 403 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 KAT5Q92993 513 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 HEXIM2Q96MH2 286 aaKnown RBP20.15■□□□□ 0.82
SF3A1-202ENST00000411423 METTL14Q9HCE5 456 aaKnown RBP20.15■□□□□ 0.82
SF3A1-202ENST00000411423 COMMD8Q9NX08 183 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 MYH10P35580 1976 aa20.15■□□□□ 0.82
SF3A1-202ENST00000411423 ZFHX2Q9C0A1 2572 aaPredicted RBP20.14■□□□□ 0.82
SF3A1-202ENST00000411423 TRDMT1O14717 391 aaKnown RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 EGFP01133 1207 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 MBL2P11226 248 aaPredicted RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 PDE6CP51160 858 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 GALK1P51570 392 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 DMWDQ09019 674 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 ZNF528Q3MIS6 628 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 C1orf228Q6PIY5 440 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 MAMSTRQ6ZN01 415 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 NKD2Q969F2 451 aaPredicted RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 SRRTQ9BXP5 876 aaKnown RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 DUSP16Q9BY84 665 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 POLR3BQ9NW08 1133 aaPredicted RBP20.14■□□□□ 0.81
SF3A1-202ENST00000411423 CFAP97Q9P2B7 532 aa20.14■□□□□ 0.81
SF3A1-202ENST00000411423 CFAP54Q96N23 3096 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 FRYLO94915 3013 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 BICDL2A1A5D9 508 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 TULP2O00295 520 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 PMM2O15305 246 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 TBX18O95935 607 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 CALCAP01258 141 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 ACO1P21399 889 aaKnown RBP20.13■□□□□ 0.81
SF3A1-202ENST00000411423 KIF11P52732 1056 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 MARSP56192 900 aaKnown RBP20.13■□□□□ 0.81
SF3A1-202ENST00000411423 LRRC32Q14392 662 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 HECTD3Q5T447 861 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 ARHGAP17Q68EM7 881 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 TTC30AQ86WT1 665 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 ARHGEF19Q8IW93 802 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 TRIML1Q8N9V2 468 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 ATP2A3Q93084 1043 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 CLSTN2Q9H4D0 955 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 SCML2Q9UQR0 700 aa20.13■□□□□ 0.81
SF3A1-202ENST00000411423 K7ESF4 209 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 DGKKQ5KSL6 1271 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 SCD5Q86SK9 330 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 CPA6Q8N4T0 437 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 ZBTB44Q8NCP5 570 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 PNPLA8Q9NP80 782 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 NUDT5Q9UKK9 219 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 USP3Q9Y6I4 520 aa20.12■□□□□ 0.81
SF3A1-202ENST00000411423 A0A1W2PQH9 124 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 RNF225M0QZC1 329 aaPredicted RBP20.11■□□□□ 0.81
SF3A1-202ENST00000411423 MDM4O15151 490 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 GREM1O60565 184 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 TLR5O60602 858 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 LILRB5O75023 590 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 CYP17A1P05093 508 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 OPRD1P41143 372 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 TUBP50607 506 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 MESP2Q0VG99 397 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 KCNH2Q12809 1159 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 CLEC17AQ6ZS10 378 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 IRF2BP1Q8IU81 584 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 ADGRG2Q8IZP9 1017 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 SPEM1Q8N4L4 309 aa20.11■□□□□ 0.81
SF3A1-202ENST00000411423 ZSWIM1Q9BR11 485 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms