RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 ACAP3Q96P50 834 aa1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 GPR101Q96P66 508 aaPredicted RBP1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 UHRF2Q96PU4 802 aa1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 DONSONQ9NYP3 566 aa1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 AMFRQ9UKV5 643 aa1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 G3BP2Q9UN86 482 aaKnown RBP1.09□□□□□ -2.23
RNU6-554P-201ENST00000410466 COL4A4P53420 1690 aaPredicted RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 ZNF785A8K8V0 405 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 PRSS2P07478 247 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 DNAH10OSP0CZ25 163 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 FCGR1AP12314 374 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 MTHFD2P13995 350 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 PPIFP30405 207 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 PSMC1P62191 440 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 MRPS9P82933 396 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 KCNB1Q14721 858 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SART3Q15020 963 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 ZNF239Q16600 458 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 CYP1B1Q16678 543 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 FNDC3BQ53EP0 1204 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 XKR6Q5GH73 641 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 BROXQ5VW32 411 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 RSPH3Q86UC2 560 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 GTSCR1Q86UQ5 136 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 PDSS2Q86YH6 399 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SIRT6Q8N6T7 355 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SMC1BQ8NDV3 1235 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 RTP4Q96DX8 246 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 FBXO17Q96EF6 278 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 CLUHP3Q96NS8 147 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 C7orf25Q9BPX7 421 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 PIMREGQ9BSJ6 248 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 TRMT61BQ9BVS5 477 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 DCLK3Q9C098 648 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SIK2Q9H0K1 926 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 DDX31Q9H8H2 851 aaKnown RBP1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SPTLC3Q9NUV7 552 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 SSX2IPQ9Y2D8 614 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 DTX4Q9Y2E6 619 aa1.08□□□□□ -2.24
RNU6-554P-201ENST00000410466 CKAP5Q14008 2032 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 A0A1W2PPC1 479 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 CLEC18AA5D8T8 446 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 KCNQ3O43525 872 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 KPNA6O60684 536 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 CPA1P15085 419 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 TOB1P50616 345 aaPredicted RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 ZNF135P52742 658 aaPredicted RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 PSG6Q00889 435 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 ROR2Q01974 943 aaKnown RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 DMP1Q13316 513 aaPredicted RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 HABP2Q14520 560 aaPredicted RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 EARS2Q5JPH6 523 aaKnown RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 ZNF484Q5JVG2 852 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 ARHGAP40Q5TG30 622 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 LAYNQ6UX15 382 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 DPY19L3Q6ZPD9 716 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 C14orf37Q86TY3 774 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 RASSF3Q86WH2 238 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 RHOT1Q8IXI2 618 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 PRR26Q8N8Z3 221 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 CLEC18CQ8NCF0 446 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 MAPK1IP1LQ8NDC0 245 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 MAFAQ8NHW3 353 aaPredicted RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 TRMT61AQ96FX7 289 aaKnown RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 IGSF21Q96ID5 467 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 QRSL1Q9H0R6 528 aaKnown RBP1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 DNAJB11Q9UBS4 358 aa1.07□□□□□ -2.24
RNU6-554P-201ENST00000410466 OR6C75A6NL08 312 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 CES2O00748 559 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 ERC2O15083 957 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 ATG13O75143 517 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 USP12O75317 370 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 KIF20AO95235 890 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 APEHP13798 732 aaKnown RBP1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 CBLP22681 906 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 LSSP48449 732 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 SEC61A1P61619 476 aaKnown RBP1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 FAM110CQ1W6H9 321 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 P2RY8Q86VZ1 359 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 KLHDC8BQ8IXV7 354 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 CKAP2LQ8IYA6 745 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 DNAJC5GQ8N7S2 189 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 OR2I1PQ8NGU4 316 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 SLC5A5Q92911 643 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 RAB24Q969Q5 203 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 MSI2Q96DH6 328 aaKnown RBP1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 PGLYRP2Q96PD5 576 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 PRR25Q96S07 402 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 PKP4Q99569 1192 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 MOV10L1Q9BXT6 1211 aaKnown RBP1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 TDP1Q9NUW8 608 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 TMEM248Q9NWD8 314 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 DNM3Q9UQ16 869 aa1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 SIRT4Q9Y6E7 314 aaPredicted RBP1.06□□□□□ -2.24
RNU6-554P-201ENST00000410466 CACNA1FO60840 1977 aa1.05□□□□□ -2.24
RNU6-554P-201ENST00000410466 TRBV5-3A0A0A0MS03 114 aa1.05□□□□□ -2.24
RNU6-554P-201ENST00000410466 IGKV6D-21A0A0A0MT36 114 aa1.05□□□□□ -2.24
RNU6-554P-201ENST00000410466 A0A0G2JK05 382 aa1.05□□□□□ -2.24
RNU6-554P-201ENST00000410466 A8MU10 97 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms