RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SLC26A9Q7LBE3 791 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PSTKQ8IV42 348 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 OR6B3Q8NGW1 331 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 UBA3Q8TBC4 463 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 SPATA18Q8TC71 538 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ACTL9Q8TC94 416 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 HAUS1Q96CS2 278 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 MRPL45Q9BRJ2 306 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 UBN1Q9NPG3 1134 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 KLHL11Q9NVR0 708 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 NINJ2Q9NZG7 142 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 SENP1Q9P0U3 644 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 MKI67P46013 3256 aaKnown RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 ALOX15BO15296 676 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TREHO43280 583 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 IL1R2P27930 398 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 PHBP35232 272 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 CHKAP35790 457 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 OTUD4Q01804 1114 aaKnown RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TMEM62Q0P6H9 643 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TRIM32Q13049 653 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 LLGL1Q15334 1064 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TRIP13Q15645 432 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 CCDC142Q17RM4 750 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 SOWAHAQ2M3V2 549 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 UBXN11Q5T124 520 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 RNASEH2BQ5TBB1 312 aaKnown RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TXNRD3NBQ6F5E7 133 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 SRLQ86TD4 932 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 ACOT1Q86TX2 421 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 RFX6Q8HWS3 928 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 EMC1Q8N766 993 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 MYCBPAPQ8TBZ2 947 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 ZNF670Q9BS34 389 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 UPF3AQ9H1J1 476 aaKnown RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 NXF3Q9H4D5 531 aaKnown RBP14.19□□□□□ -0.14
LIMS1-205ENST00000410093 CDHR5Q9HBB8 845 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 TUBGCP4Q9UGJ1 667 aa14.19□□□□□ -0.14
LIMS1-205ENST00000410093 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 E7EVH7 732 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 ACSL3O95573 720 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 CCT5P48643 541 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 SLC18A1P54219 525 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 ARL4CP56559 192 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 KRT81Q14533 505 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 NOMO1Q15155 1222 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 CCL14Q16627 93 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 KYNUQ16719 465 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 PMF1Q6P1K2 205 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 TMEM86AQ8N2M4 240 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 ZNF473Q8WTR7 871 aaKnown RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 CENPIQ92674 756 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 XPO6Q96QU8 1125 aaKnown RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 RCOR3Q9P2K3 495 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 SLC24A2Q9UI40 661 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-205ENST00000410093 IPPQ9Y573 584 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 TRPV2Q9Y5S1 764 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
LIMS1-205ENST00000410093 XPO1O14980 1071 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 ATP2A2P16615 1042 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 NR2C2P49116 596 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 VPS41P49754 854 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 CDH6P55285 790 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 PDE4CQ08493 712 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 ORC1Q13415 861 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 XRCC4Q13426 336 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 CCDC14Q49A88 953 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 BZW1Q7L1Q6 419 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 STRADAQ7RTN6 431 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 NECAB2Q7Z6G3 386 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 TTC30AQ86WT1 665 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 EPS8L3Q8TE67 593 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 FAF2Q96CS3 445 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 RNF157Q96PX1 679 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 CALN1Q9BXU9 219 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 NSRP1Q9H0G5 558 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 INTS9Q9NV88 658 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 TJP2Q9UDY2 1190 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 GTF2IRD1Q9UHL9 959 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 RRP15Q9Y3B9 282 aaKnown RBP14.17□□□□□ -0.14
LIMS1-205ENST00000410093 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
LIMS1-205ENST00000410093 SPAG6O75602 509 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 KIAA0754O94854 1291 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 RPL9P32969 192 aaKnown RBP14.16□□□□□ -0.14
LIMS1-205ENST00000410093 RAB27AP51159 221 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 ROR1Q01973 937 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 DPYSL3Q14195 570 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 HIF1AQ16665 826 aa14.16□□□□□ -0.14
LIMS1-205ENST00000410093 SMTNL2Q2TAL5 461 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms