RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FAM90A16PA6NEW6 464 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 OR2W5A6NFC9 320 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 AQP7P3A6NL99 342 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 FAM90A9PA6NNJ1 464 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 EFCAB8A8MWE9 144 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 FAM90A5PA8MXJ8 464 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 STX16-NPEPL1H3BU86 382 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 STX16O14662 325 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PPP6R2O75170 966 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 KLHL18O94889 574 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 F9P00740 461 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 CHGBP05060 677 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 CLTBP09497 229 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 FAM90A15PP0C7V4 464 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 FAM90A14PP0C7W9 464 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 CSH1P0DML2 217 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 CSH2P0DML3 217 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 SRGAP2BP0DMP2 458 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PIM1P11309 404 aaPredicted RBP5.42□□□□□ -1.54
LSM5-205ENST00000409952 XRCC6P12956 609 aaKnown RBP eCLIP5.42□□□□□ -1.54
LSM5-205ENST00000409952 PGM1P36871 562 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ADCY8P40145 1251 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PAFAH1B1P43034 410 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 RBM5P52756 815 aaKnown RBP eCLIP5.42□□□□□ -1.54
LSM5-205ENST00000409952 NLRP5P59047 1200 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
LSM5-205ENST00000409952 MC1RQ01726 317 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 MPP3Q13368 585 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 SEC23BQ15437 767 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 NPY5RQ15761 445 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 TBCEQ15813 527 aaPredicted RBP5.42□□□□□ -1.54
LSM5-205ENST00000409952 INSCQ1MX18 579 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 AMOTQ4VCS5 1084 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PRAMEF14Q5SWL7 426 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 NT5DC1Q5TFE4 455 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 NUGGCQ68CJ6 796 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 OTUD7BQ6GQQ9 843 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 RINT1Q6NUQ1 792 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ATF7IPQ6VMQ6 1270 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ZNF365Q70YC5 407 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 SYT13Q7L8C5 426 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 AOPEPQ8N6M6 819 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 CALML4Q96GE6 196 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
LSM5-205ENST00000409952 MED15Q96RN5 788 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 WRNIP1Q96S55 665 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 SPATA5L1Q9BVQ7 753 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 MXD3Q9BW11 206 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 TINAGL1Q9GZM7 467 aaPredicted RBP5.42□□□□□ -1.54
LSM5-205ENST00000409952 NELFAQ9H3P2 528 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 FAM83DQ9H4H8 585 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 TMOD4Q9NZQ9 345 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 JKAMPQ9P055 326 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ZFP69BQ9UJL9 534 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 PIAS3Q9Y6X2 628 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ATRNL1Q5VV63 1379 aa5.42□□□□□ -1.54
LSM5-205ENST00000409952 ZNF785A8K8V0 405 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 H7C4K7 107 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 WNT10BO00744 389 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 CLGNO14967 610 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 KLK10O43240 276 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 MTSS1O43312 755 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 CYP7B1O75881 506 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 VIPP01282 170 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 NR2F1P10589 423 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 CYP2C9P11712 490 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 SERPINA4P29622 427 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 PTDSS1P48651 473 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 CDK7P50613 346 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 RPP30P78346 268 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 ATP1A4Q13733 1029 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 NFIXQ14938 502 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 AFMIDQ63HM1 303 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 NAA16Q6N069 864 aaPredicted RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 KLHL24Q6TFL4 600 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 SEM1Q6ZVN7 128 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 CLEC14AQ86T13 490 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 USP37Q86T82 979 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 GALNT4Q8N4A0 578 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 TXNDC5Q8NBS9 432 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 KCNG4Q8TDN1 519 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 SLC22A17Q8WUG5 538 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 WDR60Q8WVS4 1066 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 ZCCHC14Q8WYQ9 949 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 USP6NLQ92738 828 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 GFM2Q969S9 779 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 FAM120BQ96EK7 910 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 APOPT1Q96IL0 206 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 CLIC6Q96NY7 704 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 FUZQ9BT04 418 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 SEPT11Q9NVA2 429 aaKnown RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 ZSCAN32Q9NX65 697 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 KCND3Q9UK17 655 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 TBC1D30Q9Y2I9 924 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 PSAT1Q9Y617 370 aa5.41□□□□□ -1.54
LSM5-205ENST00000409952 SOS1Q07889 1333 aaPredicted RBP5.41□□□□□ -1.54
LSM5-205ENST00000409952 TRIM64A6NGJ6 449 aa5.4□□□□□ -1.54
LSM5-205ENST00000409952 TRIM64BA6NI03 449 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms