RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 UBLCP1Q8WVY7 318 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 SNF8Q96H20 258 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ATP6V1G3Q96LB4 118 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 SLITRK1Q96PX8 696 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TWNKQ96RR1 684 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CPXM1Q96SM3 734 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 FAM129BQ96TA1 746 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 MTG1Q9BT17 334 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TRIM31Q9BZY9 425 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 UPF3AQ9H1J1 476 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TMBIM4Q9HC24 238 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 GDAP2Q9NXN4 497 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 KLK14Q9P0G3 267 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF232Q9UNY5 417 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 PIN4Q9Y237 131 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 GINS2Q9Y248 185 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 DRG1Q9Y295 367 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 NFS1Q9Y697 457 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 F8VP50 259 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 PIRO00625 290 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 SHOX2O60902 331 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 RECQL4O94761 1208 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 KRT14P02533 472 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CAPN2P17655 700 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 RFC1P35251 1148 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TMEM62Q0P6H9 643 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CRHR2Q13324 411 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TTMPQ5BVD1 217 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 FBXO47Q5MNV8 452 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ZFYVE27Q5T4F4 411 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 C9orf57Q5W0N0 161 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF365Q70YC5 407 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TRMT10CQ7L0Y3 403 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 DPH6Q7L8W6 267 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 RPAINQ86UA6 219 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 C1orf54Q8WWF1 131 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 HPS1Q92902 700 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 EIF2AQ9BY44 585 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 PHACTR1Q9C0D0 580 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 GRIP2Q9C0E4 1043 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CHST12Q9NRB3 414 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CHST7Q9NS84 486 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ASNSD1Q9NWL6 643 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 HESX1Q9UBX0 185 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 ASIC3Q9UHC3 531 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 CYTH4Q9UIA0 394 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 TSPAN16Q9UKR8 245 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 SNX9Q9Y5X1 595 aa7.87□□□□□ -1.15
CXCR4-202ENST00000409817 PDCD11Q14690 1871 aaKnown RBP7.87□□□□□ -1.15
CXCR4-202ENST00000409817 hCG_1818297A0A087WSY0 165 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 SMIM28A0A1B0GU29 152 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 TTC24A2A3L6 582 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 FAM155AB1AL88 458 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 LRCH4O75427 683 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ERBB2P04626 1255 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CYBAP13498 195 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ATF2P15336 505 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 FGFR4P22455 802 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ACTN2P35609 894 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CDKN2BP42772 138 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 KCNJ1P48048 391 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 TAF6P49848 677 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF143P52747 638 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 GYS2P54840 703 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 OGDHQ02218 1023 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 SLC25A11Q02978 314 aaKnown RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF844Q08AG5 666 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 TAZQ16635 292 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 SV2CQ496J9 727 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 PKDCCQ504Y2 493 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CYP4A22Q5TCH4 519 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 DENND2CQ68D51 928 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 KDM7AQ6ZMT4 941 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ARCQ7LC44 396 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 VSIG1Q86XK7 387 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CRYBG2Q8N1P7 616 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 NKD2Q969F2 451 aaPredicted RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ARL8AQ96BM9 186 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CCDC114Q96M63 670 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ZMAT2Q96NC0 199 aaKnown RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 CNPY3Q9BT09 278 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 TMEM109Q9BVC6 243 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 NXF3Q9H4D5 531 aaKnown RBP7.86□□□□□ -1.15
CXCR4-202ENST00000409817 HMGXB4Q9UGU5 601 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 ATP8A1Q9Y2Q0 1164 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 PTPN22Q9Y2R2 807 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 NEU2Q9Y3R4 380 aa7.86□□□□□ -1.15
CXCR4-202ENST00000409817 LRRD1A4D1F6 860 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GOLGA8SH3BPF8 625 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 SEPT4O43236 478 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 LIASO43766 372 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GJB6O95452 261 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 ITGAVP06756 1048 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 IVLP07476 585 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 C6orf222P0C671 652 aaPredicted RBP7.85□□□□□ -1.15
CXCR4-202ENST00000409817 GPD1P21695 349 aa7.85□□□□□ -1.15
CXCR4-202ENST00000409817 VAMP1P23763 118 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms