RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ARHGAP18Q8N392 663 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ARL14EPQ8N8R7 260 aaPredicted RBP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 SHC3Q92529 594 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ASIC4Q96FT7 647 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 SHDQ96IW2 340 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 NACA2Q9H009 215 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 LRRC4Q9HBW1 653 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 SIX2Q9NPC8 291 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 PLCB1Q9NQ66 1216 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 GMIPQ9P107 970 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ARHGAP26Q9UNA1 814 aa11.5□□□□□ -0.57
CHMP3-205ENST00000409810 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHMP3-205ENST00000409810 ZDBF2Q9HCK1 2354 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 C2orf78A6NCI8 922 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 FAM86C2PA6NEL3 165 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 CHADO15335 359 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 THAP12O43422 761 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 PRAMEF12O95522 483 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 ZDHHC11BP0C7U3 371 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 MBL2P11226 248 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 UCHL3P15374 230 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 TCF3P15923 654 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 BPIFB4P59827 614 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 SLC7A9P82251 487 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 UBXN1Q04323 297 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 PRKCQQ04759 706 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 PDE4CQ08493 712 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 KCNMA1Q12791 1236 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 NFKBIBQ15653 356 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 KLHDC7AQ5VTJ3 777 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 GPRIN1Q7Z2K8 1008 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 CCDC186Q7Z3E2 898 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 SUGP1Q8IWZ8 645 aaKnown RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 SIX5Q8N196 739 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 SIX6OS1Q8N1H7 587 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 UBA3Q8TBC4 463 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 CSGALNACT1Q8TDX6 532 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 SMG9Q9H0W8 520 aaKnown RBP11.49□□□□□ -0.57
CHMP3-205ENST00000409810 TRPV5Q9NQA5 729 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 CA14Q9ULX7 337 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 F5P12259 2224 aa11.49□□□□□ -0.57
CHMP3-205ENST00000409810 LRRC10BA6NIK2 292 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 CYP26A1O43174 497 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 TLR5O60602 858 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 OLFM2O95897 454 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 RALAP11233 206 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 TKTL1P51854 596 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 APBA1Q02410 837 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 GOLGA8FQ08AF8 430 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 GOLGA8DPQ0D2H9 430 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 USP4Q13107 963 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 MTF1Q14872 753 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 DRAP1Q14919 205 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-205ENST00000409810 MLF2Q15773 248 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-205ENST00000409810 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 RAB41Q5JT25 222 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 C1orf228Q6PIY5 440 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 KCTD13Q8WZ19 329 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 TFAP2BQ92481 460 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 SECISBP2LQ93073 1101 aaKnown RBP11.48□□□□□ -0.57
CHMP3-205ENST00000409810 RSPRY1Q96DX4 576 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 MSANTD3Q96H12 275 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 HSFY1Q96LI6 401 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 HSD3B7Q9H2F3 369 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 C11orf16Q9NQ32 467 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 CHORDC1Q9UHD1 332 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-205ENST00000409810 CEP83Q9Y592 693 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 FHOD1Q9Y613 1164 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 COL4A2P08572 1712 aa11.48□□□□□ -0.57
CHMP3-205ENST00000409810 KMT2EQ8IZD2 1858 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 A0A1W2PQH9 124 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 STK25O00506 426 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 FBXO21O94952 628 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ZBED1O96006 694 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SERPINC1P01008 464 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ACADSBP45954 432 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 IFNAR2P48551 515 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 IQCB1Q15051 598 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 PDGFRLQ15198 375 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SYCP1Q15431 976 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 ZNF77Q15935 545 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 SLC44A4Q53GD3 710 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 HFE2Q6ZVN8 426 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
CHMP3-205ENST00000409810 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms