RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 THSD7BQ9C0I4 1608 aa20.7■□□□□ 0.91
LIMS2-207ENST00000409808 FOXO6A8MYZ6 492 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 YY1P25490 414 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 GJC1P36383 396 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 VCPP55072 806 aaKnown RBP20.7■□□□□ 0.9
LIMS2-207ENST00000409808 MRPS6P82932 125 aaKnown RBP20.7■□□□□ 0.9
LIMS2-207ENST00000409808 MFSD7Q6UXD7 560 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 NIPA2Q8N8Q9 360 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 TMEM35BQ8NCS4 154 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 SMC6Q96SB8 1091 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 FAM118BQ9BPY3 351 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 TRABDQ9H4I3 376 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 DPP3Q9NY33 737 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 GGT7Q9UJ14 662 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 UNC5CO95185 931 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 GCAP28676 217 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 YARSP54577 528 aaKnown RBP20.7■□□□□ 0.9
LIMS2-207ENST00000409808 ZC3H12AQ5D1E8 599 aaKnown RBP20.7■□□□□ 0.9
LIMS2-207ENST00000409808 TFDP3Q5H9I0 405 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 UBXN11Q5T124 520 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 ZFYVE27Q5T4F4 411 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 DNAJC24Q6P3W2 148 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 SDCBP2Q9H190 292 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 PCDH9Q9HC56 1237 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 USH1CQ9Y6N9 552 aa20.7■□□□□ 0.9
LIMS2-207ENST00000409808 TCRBV5S1A1TA0A578 114 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 WFS1O76024 890 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 RECQL4O94761 1208 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 PECAM1P16284 738 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 MSH2P43246 934 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 GPS1Q13098 491 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 ORC1Q13415 861 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 OASLQ15646 514 aaKnown RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 ZNF667Q5HYK9 610 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 ECHDC2Q86YB7 292 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 ZNF296Q8WUU4 475 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 C18orf25Q96B23 403 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 TBC1D31Q96DN5 1066 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 RSRC1Q96IZ7 334 aaKnown RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 SNX27Q96L92 541 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 RMDN2Q96LZ7 410 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 SMYD3Q9H7B4 428 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 NOP53Q9NZM5 478 aaKnown RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 CHRNA1P02708 482 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 KRT10P13645 584 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 ALDH3A1P30838 453 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 RPL7AP62424 266 aaKnown RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 PDK4Q16654 411 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 SPDYAQ5MJ70 313 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 RNASEH2BQ5TBB1 312 aaKnown RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 KAZNQ674X7 775 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 N4BP2L2Q92802 583 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-207ENST00000409808 C2CD2Q9Y426 696 aa20.69■□□□□ 0.9
LIMS2-207ENST00000409808 SCN1AP35498 2009 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 hCG_1818297A0A087WSY0 165 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 PPEF2O14830 753 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 ATF7P17544 494 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-207ENST00000409808 ATP11AP98196 1134 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 PCBP1Q15365 356 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■■■ 32.7
LIMS2-207ENST00000409808 PARP6Q2NL67 630 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 DCUN1D2Q6PH85 259 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 POLNQ7Z5Q5 900 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 SERINC5Q86VE9 423 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 AGAP11Q8TF27 550 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 HPDLQ96IR7 371 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 TUBGCP4Q9UGJ1 667 aa20.68■□□□□ 0.9
LIMS2-207ENST00000409808 PI4K2BG5E9Z4 385 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 DCTN3O75935 186 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 KRT16P08779 473 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 KRT15P19012 456 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 BRD2P25440 801 aaKnown RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 AXLP30530 894 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 CDH5P33151 784 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 MGAT5Q09328 741 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 ATP13A4Q4VNC1 1196 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 PHTF1Q9UMS5 762 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 RALGAPA2Q2PPJ7 1873 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 SMAPO00193 183 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 INHAP05111 366 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 PPP1R15BQ5SWA1 713 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 APBB1IPQ7Z5R6 666 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 TTC13Q8NBP0 860 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 PAIP2Q9BPZ3 127 aaKnown RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 VPS37BQ9H9H4 285 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 TRMT13Q9NUP7 481 aaKnown RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 PSMC3IPQ9P2W1 217 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 HMGXB4Q9UGU5 601 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 PCDHGC3Q9UN70 934 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 TRPV2Q9Y5S1 764 aa20.67■□□□□ 0.9
LIMS2-207ENST00000409808 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.67■□□□□ 0.9
LIMS2-207ENST00000409808 POC1B-GALNT4F8VUJ3 575 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 M0QZ92 97 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 ANP32DO95626 131 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 GBP2P32456 591 aaPredicted RBP20.66■□□□□ 0.9
LIMS2-207ENST00000409808 PHBP35232 272 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 CDKN2BP42772 138 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 SLC8A3P57103 927 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 TWF2Q6IBS0 349 aaKnown RBP20.66■□□□□ 0.9
LIMS2-207ENST00000409808 PRUNE1Q86TP1 453 aa20.66■□□□□ 0.9
LIMS2-207ENST00000409808 ARRDC4Q8NCT1 418 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms