RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 XPO6Q96QU8 1125 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CCT7Q99832 543 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TRIM8Q9BZR9 551 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 RRP15Q9Y3B9 282 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 LGALS16A8MUM7 142 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PIGHQ14442 188 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TTLL9Q3SXZ7 439 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CDCA5Q96FF9 252 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 KLHL1Q9NR64 748 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 GRK4P32298 578 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PGM1P36871 562 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 FAM131BQ86XD5 332 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 BBS7Q8IWZ6 715 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CENPLQ8N0S6 344 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 BIVM-ERCC5R4GMW8 1640 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CYFIP2Q96F07 1278 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 GSAPA4D1B5 854 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 GOLGA8TH3BQL2 631 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ZW10O43264 779 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ERN1O75460 977 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 OR6A2O95222 327 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 SUPT20HL2P0C7V6 817 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CHI3L2Q15782 390 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CNGA2Q16280 664 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 EFHC1Q5JVL4 640 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PRPF39Q86UA1 669 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 MTG1Q9BT17 334 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TRABDQ9H4I3 376 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 EXTL3O43909 919 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 TPH1P17752 444 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 ACADSBP45954 432 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PCYT1AP49585 367 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 CLK1P49759 484 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 SLC25A24Q6NUK1 477 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 MTHFD1LQ6UB35 978 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 NANOGNBQ7Z5D8 188 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 BBS4Q96RK4 519 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 FICDQ9BVA6 458 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 KRCC1Q9NPI7 259 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 MRPL40Q9NQ50 206 aaKnown RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PRMT7Q9NVM4 692 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-203ENST00000409672 DNAJC16Q9Y2G8 782 aa8.69□□□□□ -1.02
SCN9A-203ENST00000409672 PYGMP11217 842 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 STX3Q13277 289 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MTFR1Q15390 333 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 DEFB118Q96PH6 123 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 RAD23BP54727 409 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 IKBKEQ14164 716 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 RARS2Q5T160 578 aaKnown RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CBWD2Q8IUF1 395 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ENGASEQ8NFI3 743 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PANX2Q96RD6 677 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PRPF18Q99633 342 aaKnown RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 NLNQ9BYT8 704 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 FMO5P49326 533 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PEX5P50542 639 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CLCN6P51797 869 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 APBA1Q02410 837 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CXCL17Q6UXB2 119 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MYO1HQ8N1T3 1032 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 EXOC2Q96KP1 924 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CELF4Q9BZC1 486 aaKnown RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ABCG8Q9H221 673 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 OLFML3Q9NRN5 406 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CRB1P82279 1406 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ALAS2P22557 587 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 BDNFP23560 247 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 S100A5P33763 92 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MTF1Q14872 753 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PDK1Q15118 436 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CNDP1Q96KN2 507 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 SOX13Q9UN79 622 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MTA2O94776 668 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ENOSF1Q7L5Y1 443 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 NECAB2Q7Z6G3 386 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 DNAAF5Q86Y56 855 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 SUSD6Q92537 303 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 EME1Q96AY2 570 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 SLC4A5Q9BY07 1137 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ACTR5Q9H9F9 607 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ETNK1Q9HBU6 452 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 CYP39A1Q9NYL5 469 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ITPK1Q13572 414 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 PPP1R26Q5T8A7 1209 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-203ENST00000409672 C16orf46Q6P387 395 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 IZUMO1Q8IYV9 350 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ANAPC2Q9UJX6 822 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 TTC26A0AVF1 554 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 AXIN1O15169 862 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 ADCYAP1R1P41586 468 aa8.68□□□□□ -1.02
SCN9A-203ENST00000409672 AP3M2P53677 418 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms