RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZNF782Q6ZMW2 699 aaPredicted RBP4.96□□□□□ -1.61
PMS1-203ENST00000409593 LIX1LQ8IVB5 337 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 KRT78Q8N1N4 520 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 DPF1Q92782 380 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 PHKBQ93100 1093 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 CCDC136Q96JN2 1154 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 STRBPQ96SI9 672 aaKnown RBP4.96□□□□□ -1.61
PMS1-203ENST00000409593 BRIP1Q9BX63 1249 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 INO80BQ9C086 356 aaPredicted RBP4.96□□□□□ -1.61
PMS1-203ENST00000409593 CIPCQ9C0C6 399 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 DHX36Q9H2U1 1008 aaKnown RBP4.96□□□□□ -1.61
PMS1-203ENST00000409593 LPAR3Q9UBY5 353 aa4.96□□□□□ -1.61
PMS1-203ENST00000409593 FNDC1Q4ZHG4 1894 aaPredicted RBP4.96□□□□□ -1.62
PMS1-203ENST00000409593 KPNA5O15131 536 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 PMPCBO75439 489 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 PARP1P09874 1014 aaKnown RBP4.96□□□□□ -1.62
PMS1-203ENST00000409593 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.62
PMS1-203ENST00000409593 DAG1Q14118 895 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 PROSER3Q2NL68 480 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 COLEC12Q5KU26 742 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 SERPINA13PQ6UXR4 307 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 RNF44Q7L0R7 432 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 RAB11FIP4Q86YS3 637 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 CCDC33Q8N5R6 958 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 TERB1Q8NA31 727 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 PNLDC1Q8NA58 520 aaKnown RBP4.96□□□□□ -1.62
PMS1-203ENST00000409593 SEMA6DQ8NFY4 1073 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 RSPRY1Q96DX4 576 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 IQCDQ96DY2 449 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 MMS19Q96T76 1030 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 UNKQ9C0B0 810 aaKnown RBP4.96□□□□□ -1.62
PMS1-203ENST00000409593 AMFRQ9UKV5 643 aa4.96□□□□□ -1.62
PMS1-203ENST00000409593 WIPF3A6NGB9 483 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 KIF3BO15066 747 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 IL18RAPO95256 599 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 ANXA2P07355 339 aaKnown RBP4.95□□□□□ -1.62
PMS1-203ENST00000409593 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
PMS1-203ENST00000409593 YY1P25490 414 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 NTSR1P30989 418 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 PIK3CBP42338 1070 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 ALDH5A1P51649 535 aaPredicted RBP4.95□□□□□ -1.62
PMS1-203ENST00000409593 RRAGBQ5VZM2 374 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 PLAG1Q6DJT9 500 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 MTHFD1LQ6UB35 978 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 FAM83DQ9H4H8 585 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 TFCP2L1Q9NZI6 479 aa4.95□□□□□ -1.62
PMS1-203ENST00000409593 POM121BA6NF01 834 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 AGPSO00116 658 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 FOXN3O00409 490 aaPredicted RBP4.94□□□□□ -1.62
PMS1-203ENST00000409593 EXOC5O00471 708 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 ABCG1P45844 678 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 GATMP50440 423 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 RENBPP51606 427 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 TIRAPP58753 221 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 PSG6Q00889 435 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 TIAL1Q01085 375 aaKnown RBP eCLIP4.94□□□□□ -1.62
PMS1-203ENST00000409593 SAFBQ15424 915 aaKnown RBP eCLIP4.94□□□□□ -1.62
PMS1-203ENST00000409593 RNASE12Q5GAN4 147 aaKnown RBP4.94□□□□□ -1.62
PMS1-203ENST00000409593 ZKSCAN2Q63HK3 967 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 C11orf44Q8N8P7 122 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 ZNF668Q96K58 619 aaPredicted RBP4.94□□□□□ -1.62
PMS1-203ENST00000409593 THAP7Q9BT49 309 aaPredicted RBP4.94□□□□□ -1.62
PMS1-203ENST00000409593 SARGQ9BW04 601 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 WDR26Q9H7D7 661 aa4.94□□□□□ -1.62
PMS1-203ENST00000409593 TISP43B9A030 160 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 THAP12O43422 761 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 FGAP02671 866 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 MYL3P08590 195 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
PMS1-203ENST00000409593 CREB1P16220 341 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 TUBA4AP68366 448 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 HTRA4P83105 476 aaPredicted RBP4.93□□□□□ -1.62
PMS1-203ENST00000409593 HSP90AB2PQ58FF8 381 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 KLHDC7AQ5VTJ3 777 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 MZT2AQ6P582 158 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 PTCHD4Q6ZW05 846 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 CHSY1Q86X52 802 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 SRRM1Q8IYB3 904 aaKnown RBP4.93□□□□□ -1.62
PMS1-203ENST00000409593 LRRC46Q96FV0 321 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 HIST1H2AAQ96QV6 131 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 HEYLQ9NQ87 328 aaPredicted RBP4.93□□□□□ -1.62
PMS1-203ENST00000409593 SNX15Q9NRS6 342 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 DNAJB11Q9UBS4 358 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 DKK4Q9UBT3 224 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 RIMKLBQ9ULI2 386 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 HPSEQ9Y251 543 aa4.93□□□□□ -1.62
PMS1-203ENST00000409593 CGB1A6NKQ9 187 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 H7C1Q1 480 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 APAF1O14727 1248 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 PMM2O15305 246 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 SNX2O60749 519 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 CYP2D6P10635 497 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 MPGP29372 298 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 FOXF2Q12947 444 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 SRSF7Q16629 238 aaKnown RBP eCLIP4.92□□□□□ -1.62
PMS1-203ENST00000409593 CERKLQ49MI3 558 aaPredicted RBP4.92□□□□□ -1.62
PMS1-203ENST00000409593 DENND2CQ68D51 928 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 CLEC9AQ6UXN8 241 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms