RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CNTN2Q02246 1040 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 DNAL1Q4LDG9 190 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 RNF112Q9ULX5 631 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 MSCO60682 206 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 HLA-DPA1P20036 260 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 CCR1P32246 355 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 SV2AQ7L0J3 742 aa25.93■■□□□ 1.74
SPIRE1-202ENST00000409402 RFX8Q6ZV50 586 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 C17orf80Q9BSJ5 609 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 C6orf203Q9P0P8 240 aaPredicted RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 DRG1Q9Y295 367 aaKnown RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 MYPNQ86TC9 1320 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 SDR42E2A6NKP2 422 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 FAM162AQ96A26 154 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 DNAJC7Q99615 494 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 CLPBQ9H078 707 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 KCTD10Q9H3F6 313 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 A0A087X0T9 212 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 FAM228BP0C875 321 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 HSPA1AP0DMV8 641 aaKnown RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 HSPA1BP0DMV9 641 aaKnown RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 CAMK2GQ13555 558 aaPredicted RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 TTI2Q6NXR4 508 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 RXFP2Q8WXD0 754 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 SMARCD1Q96GM5 515 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 RRN3Q9NYV6 651 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 ACKR2O00590 384 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 PFDN1O60925 122 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 KCNF1Q9H3M0 494 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 PLEKP08567 350 aaPredicted RBP25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 LVRNQ6Q4G3 990 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 NT5DC4Q86YG4 428 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 MYO1HQ8N1T3 1032 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 E2F7Q96AV8 911 aa25.92■■□□□ 1.74
SPIRE1-202ENST00000409402 PPP1R37O75864 691 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 AKAP3O75969 853 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 CCDC157Q569K6 752 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 ZNF555Q8NEP9 628 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 FAM167BQ9BTA0 163 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 GPRC5DQ9NZD1 345 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 CARNS1A5YM72 827 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 EVPLLA8MZ36 301 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 CASP7P55210 303 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 TERF2Q15554 542 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 UXTQ9UBK9 157 aaPredicted RBP25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 TRPC5OSA6NMA1 111 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 NCALDP61601 193 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 PSMC6P62333 389 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 PREPLQ4J6C6 727 aaPredicted RBP25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 ZPBP2Q6X784 338 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 OTOP1Q7RTM1 612 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 RIOX2Q8IUF8 465 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 FAM86B1E9PN63 330 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 FAM86B2P0C5J1 330 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 TRAPPC12Q8WVT3 735 aa25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 A1CFQ9NQ94 594 aaKnown RBP25.91■■□□□ 1.74
SPIRE1-202ENST00000409402 F8VZ95 297 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 NPM3O75607 178 aaKnown RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 RENBPP51606 427 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 DMC1Q14565 340 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MFSD4BQ5TF39 518 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 ERAP2Q6P179 960 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MMGT1Q8N4V1 131 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 ATXN3LQ9H3M9 355 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 LRRC40Q9H9A6 602 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 TRIM49D1C9J1S8 452 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MAP3K6O95382 1288 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 TBX4P57082 545 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 SLC47A2Q86VL8 602 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 TNIP2Q8NFZ5 429 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MTO1Q9Y2Z2 717 aaKnown RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 DTNAQ9Y4J8 743 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 ZMYM2Q9UBW7 1377 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MYO1GB0I1T2 1018 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 NDST1P52848 882 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 IKBKEQ14164 716 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 PPM1LQ5SGD2 360 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 RETSATQ6NUM9 610 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 KCNK16Q96T55 309 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 FICDQ9BVA6 458 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 NCAM2O15394 837 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 SLITRK3O94933 977 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 RTN3O95197 1032 aaPredicted RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 OTUD4Q01804 1114 aaKnown RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 CMTM5Q96DZ9 223 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 COPS7BQ9H9Q2 264 aaPredicted RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 INTS13Q9NVM9 706 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 RRM1P23921 792 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 PBLDP30039 288 aaPredicted RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 MCL1Q07820 350 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 RNF168Q8IYW5 571 aaPredicted RBP25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 PHACTR4Q8IZ21 702 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 NT5MQ9NPB1 228 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 SNCAIPQ9Y6H5 919 aa25.9■■□□□ 1.74
SPIRE1-202ENST00000409402 OR2W6PQ8NHA6 318 aa25.89■■□□□ 1.74
SPIRE1-202ENST00000409402 NR2E3Q9Y5X4 410 aa25.89■■□□□ 1.74
SPIRE1-202ENST00000409402 LGALS2P05162 132 aa25.89■■□□□ 1.74
SPIRE1-202ENST00000409402 CHI3L2Q15782 390 aa25.89■■□□□ 1.74
SPIRE1-202ENST00000409402 CATSPERGQ6ZRH7 1159 aa25.89■■□□□ 1.74
SPIRE1-202ENST00000409402 IFNEQ86WN2 208 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms