RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 FAM124BQ9H5Z6 455 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 AGO3Q9H9G7 860 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM105AQ9NUU6 356 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 DNAJC17Q9NVM6 304 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ASNSD1Q9NWL6 643 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 MIOSQ9NXC5 875 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SAE1Q9UBE0 346 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 USP18Q9UMW8 372 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 NOD1Q9Y239 953 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 NFS1Q9Y697 457 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ZSWIM8A7E2V4 1837 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TLDC2A0PJX2 215 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 C2CD4BA6NLJ0 364 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CYB561D2O14569 222 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CST8O60676 142 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ATP2C2O75185 946 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TRPA1O75762 1119 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 IFNB1P01574 187 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GHRP10912 638 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 LCP1P13796 627 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ATF2P15336 505 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ITIH2P19823 946 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 KDELR1P24390 212 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ACAT1P24752 427 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CD52P31358 61 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CDKN2BP42772 138 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ATP1A2P50993 1020 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ZNF143P52747 638 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ITGA8P53708 1063 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GSCP56915 257 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 COPS2P61201 443 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ZNF844Q08AG5 666 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 NOGQ13253 232 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 BYSLQ13895 437 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC29A2Q14542 456 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PTGISQ16647 500 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CCDC142Q17RM4 750 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 KRT71Q3SY84 523 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PKDCCQ504Y2 493 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TTC19Q6DKK2 380 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TRNP1Q6NT89 227 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 LRIG3Q6UXM1 1119 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 POLNQ7Z5Q5 900 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SERINC5Q86VE9 423 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 RFX6Q8HWS3 928 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ADGRF2Q8IZF7 708 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PRR7Q8TB68 274 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC2A14Q8TDB8 520 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SLCO2A1Q92959 643 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SNF8Q96H20 258 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CFAP57Q96MR6 1250 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CDK15Q96Q40 435 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CNPY3Q9BT09 278 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CALN1Q9BXU9 219 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TXLNGYQ9BZA5 131 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 UPF3AQ9H1J1 476 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 NGRNQ9NPE2 291 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GDAP2Q9NXN4 497 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ANAPC5Q9UJX4 755 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 BRCA2P51587 3418 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GRIN2DO15399 1336 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SMIM23A6NLE4 172 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CFAP99D6REC4 459 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GPR182O15218 404 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PAPSS1O43252 624 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 LIASO43766 372 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GDF9O60383 454 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TRUB2O95900 331 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SHBGP04278 402 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 THP07101 528 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ZSCAN5DPP0CG00 497 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ETS1P14921 441 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 IVDP26440 423 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 HPDP32754 393 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SCNN1GP51170 649 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CDH6P55285 790 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SLC6A3Q01959 620 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PTK6Q13882 451 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CTC1Q2NKJ3 1217 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 DEFB115Q30KQ5 88 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 UBAP2Q5T6F2 1119 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 WSCD1Q658N2 575 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 DENND2CQ68D51 928 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SYDE1Q6ZW31 735 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TMEM110Q86TL2 294 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 OSTM1Q86WC4 334 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 HACE1Q8IYU2 909 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CRYBG2Q8N1P7 616 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CCDC89Q8N998 374 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ANKRD52Q8NB46 1076 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 GLIS1Q8NBF1 620 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ACTL9Q8TC94 416 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CLEC4CQ8WTT0 213 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 CAPNS2Q96L46 248 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 ATP6V1G3Q96LB4 118 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PWWP2AQ96N64 755 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PPP1R10Q96QC0 940 aaKnown RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 TMEM121Q9BTD3 319 aa4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 SENP6Q9GZR1 1112 aaPredicted RBP4.17□□□□□ -1.74
LRRTM4-201ENST00000409088 PABPC3Q9H361 631 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms