RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 KIAA0319Q5VV43 1072 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 PAQR9Q6ZVX9 377 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CYP4V2Q6ZWL3 525 aaPredicted RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 ZNF598Q86UK7 904 aaKnown RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 MAP7D3Q8IWC1 876 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 ARL8AQ96BM9 186 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 UROC1Q96N76 676 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 MAK16Q9BXY0 300 aaKnown RBP19.84■□□□□ 0.77
USP39-202ENST00000409025 RAB6CQ9H0N0 254 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CRTAC1Q9NQ79 661 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 RGS18Q9NS28 235 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 CDH9Q9ULB4 789 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 NFS1Q9Y697 457 aa19.84■□□□□ 0.77
USP39-202ENST00000409025 KBTBD13C9JR72 458 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 B3GAT3O94766 335 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 ENDOD1O94919 500 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 ITGAVP06756 1048 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 FAM200BP0CF97 657 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 KLRC2P26717 231 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 VPS41P49754 854 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 ITGA8P53708 1063 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 PDK2Q15119 407 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 OASLQ15646 514 aaKnown RBP19.83■□□□□ 0.77
USP39-202ENST00000409025 CCDC142Q17RM4 750 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 TTMPQ5BVD1 217 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 TRAF7Q6Q0C0 670 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 ALLCQ8N6M5 410 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 FAM76AQ8TAV0 307 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 SPATA18Q8TC71 538 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 TEKT4Q8WW24 435 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 KCTD13Q8WZ19 329 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 TBCBQ99426 244 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 TSPYL1Q9H0U9 437 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 PABPC3Q9H361 631 aaKnown RBP19.83■□□□□ 0.77
USP39-202ENST00000409025 ANAPC5Q9UJX4 755 aa19.83■□□□□ 0.77
USP39-202ENST00000409025 ARVCFO00192 962 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 PCSK1P29120 753 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 OTUD4Q01804 1114 aaKnown RBP19.82■□□□□ 0.76
USP39-202ENST00000409025 ADIGQ0VDE8 80 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 KRT81Q14533 505 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 CLEC20AQ6ZU45 233 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 METTL23Q86XA0 190 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 SLC35B2Q8TB61 432 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 ACTL9Q8TC94 416 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 LRRC4Q9HBW1 653 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 PHF24Q9UPV7 400 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 EOMESO95936 686 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 RARGP13631 454 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 ARSEP51690 589 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 EIF3BP55884 814 aaKnown RBP19.82■□□□□ 0.76
USP39-202ENST00000409025 GLIPR1L2Q4G1C9 344 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 RHBDF2Q6PJF5 856 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 DDX23Q9BUQ8 820 aaKnown RBP19.82■□□□□ 0.76
USP39-202ENST00000409025 KRT82Q9NSB4 513 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP39-202ENST00000409025 PCNTO95613 3336 aa19.82■□□□□ 0.76
USP39-202ENST00000409025 APOC4-APOC2K7ER74 178 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 TP73O15350 636 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 INPPL1O15357 1258 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 BEST1O76090 585 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 APOC2P02655 101 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 MYZAPP0CAP1 466 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 HDAC4P56524 1084 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 ZNF844Q08AG5 666 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 TFDP2Q14188 446 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 DPYSL3Q14195 570 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 MBTPS1Q14703 1052 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 IZUMO3Q5VZ72 239 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 DENND2CQ68D51 928 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 SLC24A5Q71RS6 500 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 CENPIQ92674 756 aaPredicted RBP19.81■□□□□ 0.76
USP39-202ENST00000409025 PKNOX2Q96KN3 472 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 C11orf84Q9BUA3 381 aaPredicted RBP19.81■□□□□ 0.76
USP39-202ENST00000409025 TMBIM4Q9HC24 238 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 DSEQ9UL01 958 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 PTCH2Q9Y6C5 1203 aa19.81■□□□□ 0.76
USP39-202ENST00000409025 MYBPHLA2RUH7 354 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 C9IYK1 514 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 MDM4O15151 490 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 MAP3K7CLP57077 242 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 IFFO1Q0D2I5 559 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 RTN4RL1Q86UN2 441 aaPredicted RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 FAM35AQ86V20 835 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 CCDC25Q86WR0 208 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 SIX6OS1Q8N1H7 587 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 MYCBPAPQ8TBZ2 947 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 PCED1BQ96HM7 432 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.8■□□□□ 0.76
USP39-202ENST00000409025 SAGE1Q9NXZ1 904 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 PSD3Q9NYI0 1048 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 SAE1Q9UBE0 346 aaPredicted RBP19.8■□□□□ 0.76
USP39-202ENST00000409025 ARHGEF37A1IGU5 675 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 I3L4J1 428 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 SGK1O00141 431 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 AP1G2O75843 785 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 CYP11A1P05108 521 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 NUDT17P0C025 328 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 MATKP42679 507 aa19.8■□□□□ 0.76
USP39-202ENST00000409025 BRCC3P46736 316 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms