RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 HERC6Q8IVU3 1022 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 NPTXRO95502 500 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 FYNP06241 537 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 GCLCP48506 637 aaPredicted RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 CENPAP49450 140 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 FCGRTP55899 365 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 SKP1P63208 163 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 BFSP2Q13515 415 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 LRRC36Q1X8D7 754 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 SGO1Q5FBB7 561 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 WDR93Q6P2C0 686 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 SLC26A11Q86WA9 606 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 ZNF557Q8N988 423 aaPredicted RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 RMND5BQ96G75 393 aaPredicted RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 MAGED4Q96JG8 741 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 TBCBQ99426 244 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
LTBP1-204ENST00000407925 ACOT9Q9Y305 439 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 HECW2Q9P2P5 1572 aa11.1□□□□□ -0.63
LTBP1-204ENST00000407925 TRIM24O15164 1050 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 KRT6AP02538 564 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 KRT6BP04259 564 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 KRT6CP48668 564 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 PPP4CP60510 307 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 C16orf62Q7Z3J2 963 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 EXD1Q8NHP7 514 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ZCCHC2Q9C0B9 1178 aaKnown RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CEP44Q9C0F1 390 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CAAP1Q9H8G2 361 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 PDGFCQ9NRA1 345 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ICAM1P05362 532 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 TPBGLP0DKB5 382 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 IRF1P10914 325 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 HPGDP15428 266 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ATXN3P54252 364 aaPredicted RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 MPZL3Q6UWV2 235 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 C10orf53Q8N6V4 93 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 AP1G2O75843 785 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 GYPCP04921 128 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ZNF23P17027 643 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 KLRC1P26715 233 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ZNF157P51786 506 aaPredicted RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ATP6AP1LQ52LC2 224 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SLC44A4Q53GD3 710 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SLFN11Q7Z7L1 901 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 TARS2Q9BW92 718 aaKnown RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 RAD21L1Q9H4I0 556 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 MROH8Q9H579 483 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 PHTF1Q9UMS5 762 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 LOC100653049A0A140TA62 436 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CENPXA8MT69 81 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 KRT34O76011 436 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ITGB3P05106 788 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 MPOP05164 745 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CDC16Q13042 620 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ZDHHC17Q8IUH5 632 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 CGRRF1Q99675 332 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 VTI1BQ9UEU0 232 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
LTBP1-204ENST00000407925 MAPRE3Q9UPY8 281 aa11.09□□□□□ -0.63
LTBP1-204ENST00000407925 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 H0YC42 278 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 VPS4BO75351 444 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 PMPCBO75439 489 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 SLC16A1P53985 500 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 ITGA1P56199 1179 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 ZCWPW2Q504Y3 356 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 ZNF786Q8N393 782 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 C1orf131Q8NDD1 294 aaKnown RBP11.08□□□□□ -0.64
LTBP1-204ENST00000407925 FAM45AQ8TCE6 357 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 ACTRT1Q8TDG2 376 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 GJD4Q96KN9 370 aaPredicted RBP11.08□□□□□ -0.64
LTBP1-204ENST00000407925 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 NMRK2Q9NPI5 230 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 hCG_2014768A0A024R1R8 64 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 C15orf38-AP3S2A0A0A6YYH1 394 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 PDZK1P1A8MUH7 402 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 SNAP23O00161 211 aa11.08□□□□□ -0.64
LTBP1-204ENST00000407925 XPO1O14980 1071 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms