RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 RFWD2Q8NHY2 731 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 NSMCE1Q8WV22 266 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 SLC7A6OSQ96CW6 309 aaPredicted RBP17.28■□□□□ 0.36
COL23A1-202ENST00000407622 HPDLQ96IR7 371 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 LRMDAQ9H2I8 198 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 CXorf56Q9H5V9 222 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 RSAD1Q9HA92 442 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 ASNSD1Q9NWL6 643 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 DCTN4Q9UJW0 460 aa17.28■□□□□ 0.36
COL23A1-202ENST00000407622 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 PFKMP08237 780 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 RGS7P49802 495 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 FAXCQ5TGI0 409 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 OR6B2Q6IFH4 312 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.36
COL23A1-202ENST00000407622 CXCL16Q9H2A7 254 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 SMARCAD1Q9H4L7 1026 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 RBPJLQ9UBG7 517 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 TRIP11Q15643 1979 aa17.27■□□□□ 0.36
COL23A1-202ENST00000407622 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.35
COL23A1-202ENST00000407622 HBP1O60381 514 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 FAM155BO75949 473 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 VTNP04004 478 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 GPD1P21695 349 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 ATP11AP98196 1134 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 FAAP100Q0VG06 881 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 PTK7Q13308 1070 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 TAF1BQ53T94 588 aaPredicted RBP17.27■□□□□ 0.35
COL23A1-202ENST00000407622 ZC3H12AQ5D1E8 599 aaKnown RBP17.27■□□□□ 0.35
COL23A1-202ENST00000407622 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.35
COL23A1-202ENST00000407622 ERO1BQ86YB8 467 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 TSPAN16Q9UKR8 245 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 C15orf41Q9Y2V0 281 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 TEX264Q9Y6I9 313 aa17.27■□□□□ 0.35
COL23A1-202ENST00000407622 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 H7C0C1 242 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 INSRRP14616 1297 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 ARF4P18085 180 aaPredicted RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 IL4RP24394 825 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 PCK1P35558 622 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 ATP5OP48047 213 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 LRRC6Q86X45 466 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 EXOC8Q8IYI6 725 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 CNPY3Q9BT09 278 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 PRMT7Q9NVM4 692 aaPredicted RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 GEMIN8Q9NWZ8 242 aaKnown RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 LOC102724159A0A0B4J2E5 919 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 A0A1B0GUA9 196 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 DIAPH2O60879 1101 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 DCTN3O75935 186 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 HMGCRP04035 888 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 VDRP11473 427 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 CCND1P24385 295 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 YWHAGP61981 247 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 PWP2Q15269 919 aaKnown RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 CA9Q16790 459 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 MTDHQ86UE4 582 aaKnown RBP17.26■□□□□ 0.35
COL23A1-202ENST00000407622 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 CYTH2Q99418 400 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 SCN1AP35498 2009 aa17.26■□□□□ 0.35
COL23A1-202ENST00000407622 SPDYE5A6NIY4 337 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 GM2AP17900 193 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 EPHB2P29323 1055 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 ALDH3A1P30838 453 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 ACAP1Q15027 740 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 SEPT7Q16181 437 aaKnown RBP17.25■□□□□ 0.35
COL23A1-202ENST00000407622 CCDC14Q49A88 953 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 SH2D5Q6ZV89 423 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 PLD5Q8N7P1 536 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 RNF157Q96PX1 679 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 MMP19Q99542 508 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 VRTNQ9H8Y1 702 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 NKX1-2Q9UD57 310 aaPredicted RBP17.25■□□□□ 0.35
COL23A1-202ENST00000407622 C2CD2LO14523 706 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 C1QAP02745 245 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 MT-ND3P03897 115 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 MCF2P10911 925 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 PHKA2P46019 1235 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 TMEM132DQ14C87 1099 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 SCYL2Q6P3W7 929 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 PRR11Q96HE9 360 aaPredicted RBP17.25■□□□□ 0.35
COL23A1-202ENST00000407622 FAM111AQ96PZ2 611 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 TRIM56Q9BRZ2 755 aaKnown RBP17.25■□□□□ 0.35
COL23A1-202ENST00000407622 TACO1Q9BSH4 297 aaKnown RBP17.25■□□□□ 0.35
COL23A1-202ENST00000407622 TBC1D10AQ9BXI6 508 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 MANSC1Q9H8J5 431 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 PLAC1Q9HBJ0 212 aa17.25■□□□□ 0.35
COL23A1-202ENST00000407622 NOP53Q9NZM5 478 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms