RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 MMS19Q96T76 1030 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 CFAP97Q9P2B7 532 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 SIX4Q9UIU6 781 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 KLK13Q9UKR3 277 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
APOBEC3B-204ENST00000407298 HELZP42694 1942 aaKnown RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 OLFM2O95897 454 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 PDCP20941 246 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 LMO2P25791 158 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 GNL1P36915 607 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 TXLNAP40222 546 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 WNT7BP56706 349 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 USP46P62068 366 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 KCNA1Q09470 495 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 TAF10Q12962 218 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 EMC10Q5UCC4 262 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 STXBP4Q6ZWJ1 553 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 OVCA2Q8WZ82 227 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 FAM124BQ9H5Z6 455 aaPredicted RBP13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 CAPN10Q9HC96 672 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 CRTAC1Q9NQ79 661 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 INTS13Q9NVM9 706 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 DEC1Q9P2X7 70 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.32
APOBEC3B-204ENST00000407298 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 F8VP50 259 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 ADAM23O75077 832 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 RTN3O95197 1032 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 KDSRQ06136 332 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZNF33AQ06730 810 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 KBTBD7Q8WVZ9 684 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 PCED1BQ96HM7 432 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 DUSP9Q99956 384 aaKnown RBP13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 PCIF1Q9H4Z3 704 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 SUSD2Q9UGT4 822 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 PTPRDP23468 1912 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 FREM2Q5SZK8 3169 aa13.07□□□□□ -0.32
APOBEC3B-204ENST00000407298 PLXND1Q9Y4D7 1925 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 HAX1O00165 279 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 TAF4O00268 1085 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 HCRTO43612 131 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 TACC1O75410 805 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 HOXB2P14652 356 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 IDEP14735 1019 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 GNSP15586 552 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 YWHAQP27348 245 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 NTSR1P30989 418 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 PROSER1Q86XN7 944 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 SFTPA1Q8IWL2 248 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 OR6B3Q8NGW1 331 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZDHHC5Q9C0B5 715 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms