RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 LPIN3Q9BQK8 851 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 RXFP1Q9HBX9 757 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 ATAD5Q96QE3 1844 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 TRIM49D1C9J1S8 452 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 ALOX15BO15296 676 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 TMEM63AO94886 807 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 TRUB2O95900 331 aaKnown RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 PYGBP11216 843 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 ARL4AP40617 200 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 SLC26A2P50443 739 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 SESN2P58004 480 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 NCALDP61601 193 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 ENPEPQ07075 957 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 NME3Q13232 169 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 GPRC5AQ8NFJ5 357 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 BEST2Q8NFU1 509 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 NKD2Q969F2 451 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 PIWIL1Q96J94 861 aaKnown RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 DNAI2Q9GZS0 605 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 MYLK2Q9H1R3 596 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 KIAA1217Q5T5P2 1943 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 RASSF9O75901 435 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 KRT37O76014 449 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 CBX6O95503 412 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 GSTA1P08263 222 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 IQCF3P0C7M6 154 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 MCF2P10911 925 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 RASSF2P50749 326 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 SATB1Q01826 763 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 OASLQ15646 514 aaKnown RBP12.4□□□□□ -0.43
PCNX4-204ENST00000406949 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 ZNF484Q5JVG2 852 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.43
PCNX4-204ENST00000406949 POLNQ7Z5Q5 900 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 FZD8Q9H461 694 aa12.4□□□□□ -0.43
PCNX4-204ENST00000406949 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.4□□□□□ -0.43
PCNX4-204ENST00000406949 IGKV6D-21A0A0A0MT36 114 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 TP73O15350 636 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 CILPO75339 1184 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 ABHD2P08910 425 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 SLC10A6Q3KNW5 377 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
PCNX4-204ENST00000406949 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
PCNX4-204ENST00000406949 MROH9Q5TGP6 573 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 HEATR6Q6AI08 1181 aaKnown RBP12.39□□□□□ -0.43
PCNX4-204ENST00000406949 FAM131BQ86XD5 332 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 MROH8Q9H579 483 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 SLC24A2Q9UI40 661 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 KRT16P08779 473 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 AP1B1Q10567 949 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 XRCC4Q13426 336 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 SNAPC2Q13487 334 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 RFX8Q6ZV50 586 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
PCNX4-204ENST00000406949 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 PDZD7Q9H5P4 517 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
PCNX4-204ENST00000406949 CXCL11O14625 94 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 NEBLO76041 1014 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 STK10O94804 968 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 CCDC130P13994 396 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 STIP1P31948 543 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 ZNF143P52747 638 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 ARFIP2P53365 341 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 SARNPP82979 210 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 GRIK4Q16099 956 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 NLRP9Q7RTR0 991 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 MTDHQ86UE4 582 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 SLC35B2Q8TB61 432 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 RNF34Q969K3 372 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 GCOM2Q9BZD3 368 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 ASB7Q9H672 318 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 MANSC1Q9H8J5 431 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 PAK5Q9P286 719 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 FAM155BO75949 473 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 SAT1P21673 171 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 BGNP21810 368 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 PDE1BQ01064 536 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms