RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CILPO75339 1184 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 SMNDC1O75940 238 aaKnown RBP eCLIP19.24■□□□□ 0.676e-11■■■□□ 15.9
EWSR1-207ENST00000406548 IL1BP01584 269 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 LMNAP02545 664 aaKnown RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 NFICP08651 508 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 NEFHP12036 1026 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 SERPINB3P29508 390 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 BLMHQ13867 455 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 FAM47CQ5HY64 1035 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 SYCP2LQ5T4T6 812 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 C4orf50Q6ZRC1 276 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 FAF2Q96CS3 445 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 FAXDC2Q96IV6 333 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 ZNF668Q96K58 619 aaPredicted RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 NLRP4Q96MN2 994 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 BTBD10Q9BSF8 475 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 INO80BQ9C086 356 aaPredicted RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 PNPLA8Q9NP80 782 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 CNTN3Q9P232 1028 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 TGFB3P10600 412 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 GPD1P21695 349 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 ABL2P42684 1182 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 GPD2P43304 727 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 TFDP2Q14188 446 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 ANGEL2Q5VTE6 544 aaKnown RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 RFWD3Q6PCD5 774 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 CYP4V2Q6ZWL3 525 aaPredicted RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 EEPD1Q7L9B9 569 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 EXOC8Q8IYI6 725 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 TMEM130Q8N3G9 435 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 TMEM176AQ96HP8 235 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 NSL1Q96IY1 281 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 DCLRE1BQ9H816 532 aa19.24■□□□□ 0.67
EWSR1-207ENST00000406548 FBXO6Q9NRD1 293 aaPredicted RBP19.24■□□□□ 0.67
EWSR1-207ENST00000406548 H7C0C1 242 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 NFKBIEO00221 500 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 DLDP09622 509 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 ATP5OP48047 213 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 ZBTB16Q05516 673 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 SH3PXD2AQ5TCZ1 1133 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 LBX2Q6XYB7 198 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 SLC26A11Q86WA9 606 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 CFAP36Q96G28 342 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 TTLL3Q9Y4R7 772 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 AVILO75366 819 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 ITGB3P05106 788 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 GJB1P08034 283 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 SERPINB4P48594 390 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 PTDSS1P48651 473 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 YWHAZP63104 245 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 CMPK2Q5EBM0 449 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 TTC39BQ5VTQ0 682 aaPredicted RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 PRPF39Q86UA1 669 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 APOBEC3FQ8IUX4 373 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 PRR11Q96HE9 360 aaPredicted RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 GPR20Q99678 358 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 CNPY3Q9BT09 278 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 FAM167BQ9BTA0 163 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 IQCGQ9H095 443 aaKnown RBP19.23■□□□□ 0.67
EWSR1-207ENST00000406548 RAB6BQ9NRW1 208 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 BTBD7Q9P203 1132 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 PAK5Q9P286 719 aa19.23■□□□□ 0.67
EWSR1-207ENST00000406548 COPEO14579 308 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 LGR5O75473 907 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 HMGCRP04035 888 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 CBLBQ13191 982 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 DALRD3Q5D0E6 543 aaKnown RBP19.22■□□□□ 0.67
EWSR1-207ENST00000406548 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 NOL9Q5SY16 702 aaKnown RBP19.22■□□□□ 0.67
EWSR1-207ENST00000406548 TRIM68Q6AZZ1 485 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 TRNP1Q6NT89 227 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 C1orf228Q6PIY5 440 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 TEX9Q8N6V9 391 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 MICAL1Q8TDZ2 1067 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 TNFSF13BQ9Y275 285 aa19.22■□□□□ 0.67
EWSR1-207ENST00000406548 C2CD4BA6NLJ0 364 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 TRIM49D1C9J1S8 452 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 KLF11O14901 512 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 ARIH2O95376 493 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 C1QAP02745 245 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 MBTD1Q05BQ5 628 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 KRT72Q14CN4 511 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 RAB6CQ53S08 254 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 RNF157Q96PX1 679 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 SRPK1Q96SB4 655 aaKnown RBP19.21■□□□□ 0.67
EWSR1-207ENST00000406548 FRMD8Q9BZ67 464 aaPredicted RBP19.21■□□□□ 0.67
EWSR1-207ENST00000406548 RAB6CQ9H0N0 254 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
EWSR1-207ENST00000406548 USP29Q9HBJ7 922 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 GYG2O15488 501 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 GSC2O15499 205 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 KCNN4O15554 427 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 PRPSAP2O60256 369 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 VDRP11473 427 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 ATP6V1C1P21283 382 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 KRT81Q14533 505 aa19.21■□□□□ 0.67
EWSR1-207ENST00000406548 C15orf59Q2T9L4 293 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms