RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SNX8Q9Y5X2 465 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 NCF1BA6NI72 391 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 NCF1CA8MVU1 366 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 NCF1P14598 390 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SERPINB3P29508 390 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 MYOZ2Q9NPC6 264 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SDR42E2A6NKP2 422 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 RPLP2P05387 115 aaKnown RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 STIP1P31948 543 aaKnown RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 ZNF786Q8N393 782 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SYN2Q92777 582 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SIKE1Q9BRV8 207 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 CYP27B1O15528 508 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 GEMP55040 296 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 CUL2Q13617 745 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 TRIM16LQ309B1 348 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 RERGLQ9H628 205 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 CYP39A1Q9NYL5 469 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 PLA2G4CQ9UP65 541 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 MYMKA6NI61 221 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SUPT7LO94864 414 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 NOS3P29474 1203 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 PBLDP30039 288 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 FEN1P39748 380 aaKnown RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 KPNA1P52294 538 aaPredicted RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 SEL1L3Q68CR1 1132 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 JAMLQ86YT9 394 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 MRPS31Q92665 395 aaKnown RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 RAD51CO43502 376 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 CKBP12277 381 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 FAM45BPQ6NSW5 357 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 CARNMT1Q8N4J0 409 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 EFCAB1Q9HAE3 211 aa12.44□□□□□ -0.42
SMCR8-201ENST00000406438 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
SMCR8-201ENST00000406438 ATP6V1B1P15313 513 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 CNTFP26441 200 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 PDK2Q15119 407 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 VN1R5Q7Z5H4 357 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 LRRC6Q86X45 466 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 CLYBLQ8N0X4 340 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 NAT9Q9BTE0 207 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 CCT8L1PA6NM43 557 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 TARSP26639 723 aaKnown RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 DDX39BQ13838 428 aaKnown RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 BOLA3Q53S33 107 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 C11orf88Q6PI97 169 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 ADGRB3O60242 1522 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 PLA2G6O60733 806 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 ZNF23P17027 643 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 VHLP40337 213 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 MIER2Q8N344 545 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 ADI1Q9BV57 179 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 PARVBQ9HBI1 364 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 SPON1Q9HCB6 807 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 HOXA2O43364 376 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 PSMC6P62333 389 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 NLRP9Q7RTR0 991 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 MOSPD2Q8NHP6 518 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 DDI1Q8WTU0 396 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 RPRD1AQ96P16 312 aaPredicted RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 FAM118BQ9BPY3 351 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 MKNK1Q9BUB5 465 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 CKMP06732 381 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 EPHB3P54753 998 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 CAAP1Q9H8G2 361 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 WDR41Q9HAD4 459 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 WHRNQ9P202 907 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 USP18Q9UMW8 372 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 DRG1Q9Y295 367 aaKnown RBP12.43□□□□□ -0.42
SMCR8-201ENST00000406438 JAK1P23458 1154 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 BCAT1P54687 386 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 TSGA10IPQ3SY00 556 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 TAF2Q6P1X5 1199 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 MAGI3Q5TCQ9 1506 aa12.43□□□□□ -0.42
SMCR8-201ENST00000406438 GLRA3O75311 464 aa12.42□□□□□ -0.42
SMCR8-201ENST00000406438 NUP107P57740 925 aa12.42□□□□□ -0.42
SMCR8-201ENST00000406438 EN1Q05925 392 aaPredicted RBP12.42□□□□□ -0.42
SMCR8-201ENST00000406438 RCN1Q15293 331 aa12.42□□□□□ -0.42
SMCR8-201ENST00000406438 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
SMCR8-201ENST00000406438 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
SMCR8-201ENST00000406438 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
SMCR8-201ENST00000406438 RIT2Q99578 217 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms