RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 CNGA2Q16280 664 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 ITPRIPL2Q3MIP1 535 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 TCP11X2Q5H9J9 407 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 LCLAT1Q6UWP7 414 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 TPRG1Q6ZUI0 275 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 RRAGAQ7L523 313 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 CCDC186Q7Z3E2 898 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 TADA2BQ86TJ2 420 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 RALGPS2Q86X27 583 aaPredicted RBP12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 ARHGAP18Q8N392 663 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 TMEM105Q8N8V8 129 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 EXOC4Q96A65 974 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 SLC22A12Q96S37 553 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 FAM83CQ9BQN1 747 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 NAT10Q9H0A0 1025 aaKnown RBP12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 UBE2TQ9NPD8 197 aaPredicted RBP12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 HEBP1Q9NRV9 189 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 GKN1Q9NS71 199 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 CCL26Q9Y258 94 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 NFE2L3Q9Y4A8 694 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
AC007249.1-201ENST00000404616 O00370 1275 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 SLC9A3R1O14745 358 aaPredicted RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 PON1P27169 355 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 KPNA1P52294 538 aaPredicted RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 ZNF132P52740 706 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 IFRD2Q12894 506 aaPredicted RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 USP4Q13107 963 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 NR1H3Q13133 447 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 MTF1Q14872 753 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 ZNF77Q15935 545 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 MEA1Q16626 185 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 KLHDC10Q6PID8 442 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 PIGZQ86VD9 579 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 ARHGEF19Q8IW93 802 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 SCML4Q8N228 414 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 RBBP8NLQ8NC74 664 aaPredicted RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 ANKRD20A12PQ8NF67 263 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 SH3RF2Q8TEC5 729 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 OSCP1Q8WVF1 389 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 KCTD13Q8WZ19 329 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 FAM3CQ92520 227 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 IER2Q9BTL4 223 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 RNF38Q9H0F5 515 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 SMG9Q9H0W8 520 aaKnown RBP12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 LTB4R2Q9NPC1 389 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 TSPAN16Q9UKR8 245 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 PIAS3Q9Y6X2 628 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 COL4A2P08572 1712 aa12.33□□□□□ -0.44
AC007249.1-201ENST00000404616 FAM170BA6NMN3 283 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 MED7O43513 233 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 MBL2P11226 248 aaPredicted RBP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 RALAP11233 206 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 SLC9A1P19634 815 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 ATP5C1P36542 298 aaKnown RBP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 RPS9P46781 194 aaKnown RBP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 IFNAR2P48551 515 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 PTPN5P54829 565 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 MYL5Q02045 173 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 RUNX3Q13761 415 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 GOLGA7BQ2TAP0 167 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 CDKAL1Q5VV42 579 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 ATP2A3Q93084 1043 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 CLDN23Q96B33 292 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 OTUB2Q96DC9 234 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 NACA2Q9H009 215 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 SAMSN1Q9NSI8 373 aaKnown RBP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 DUS2Q9NX74 493 aaKnown RBP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 GMIPQ9P107 970 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC007249.1-201ENST00000404616 E2F8A0AVK6 867 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 RNF225M0QZC1 329 aaPredicted RBP12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 LEFTY2O00292 366 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 COCHO43405 550 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 PI15O43692 258 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 TLR5O60602 858 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 KRT5P13647 590 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 CTHP32929 405 aa12.31□□□□□ -0.44
AC007249.1-201ENST00000404616 PDE4CQ08493 712 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms