RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 MMP8P22894 467 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 HSPA1LP34931 641 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 MYL6P60660 151 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 GK3PQ14409 553 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 ZACNQ401N2 412 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 CASC4Q6P4E1 433 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 C12orf56Q8IXR9 622 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 HIC2Q96JB3 615 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 MSTO1Q9BUK6 570 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.81
SMC1B-202ENST00000404354 MYO18AQ92614 2054 aaKnown RBP9.96□□□□□ -0.81
SMC1B-202ENST00000404354 STAM2O75886 525 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 DGKIO75912 1065 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 MAPTP10636 758 aaKnown RBP9.96□□□□□ -0.81
SMC1B-202ENST00000404354 GRIA1P42261 906 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 TFAMQ00059 246 aaKnown RBP9.96□□□□□ -0.81
SMC1B-202ENST00000404354 DPYSL3Q14195 570 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 HIC1Q14526 733 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 ACAP1Q15027 740 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 SLC5A9Q2M3M2 681 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 CIAPIN1Q6FI81 312 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 SPATA24Q86W54 205 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 CRLF3Q8IUI8 442 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 GDPD5Q8WTR4 605 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 OPTNQ96CV9 577 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 PGBD4Q96DM1 585 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 TRAPPC9Q96Q05 1148 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 SMYD2Q9NRG4 433 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 GALNT8Q9NY28 637 aa9.96□□□□□ -0.81
SMC1B-202ENST00000404354 ABLIM1O14639 778 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 TM7SF2O76062 418 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 C4BPAP04003 597 aaKnown RBP9.96□□□□□ -0.82
SMC1B-202ENST00000404354 KRT3P12035 628 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 ABCG1P45844 678 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 ACTR3P61158 418 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 ST13P4Q8IZP2 240 aaPredicted RBP9.96□□□□□ -0.82
SMC1B-202ENST00000404354 GALNT4Q8N4A0 578 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 OR6Y1Q8NGX8 325 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 SLC35B2Q8TB61 432 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 FAM81AQ8TBF8 368 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 CENPKQ9BS16 269 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 ZNF341Q9BYN7 854 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 IFT122Q9HBG6 1241 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 XPNPEP1Q9NQW7 623 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
SMC1B-202ENST00000404354 TAGLN3Q9UI15 199 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 STRIP2Q9ULQ0 834 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 DNAJC16Q9Y2G8 782 aa9.96□□□□□ -0.82
SMC1B-202ENST00000404354 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.82
SMC1B-202ENST00000404354 HEMK1Q9Y5R4 338 aaPredicted RBP9.96□□□□□ -0.82
SMC1B-202ENST00000404354 C10orf71Q711Q0 1435 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 KCNN4O15554 427 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CREB3O43889 395 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PFDN1O60925 122 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 LRCH4O75427 683 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ITGAVP06756 1048 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 MRPS5P82675 430 aaKnown RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PDCD2Q16342 344 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 DENND1BQ6P3S1 775 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CEP128Q6ZU80 1094 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 MARK2Q7KZI7 788 aaKnown RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 DRAXINQ8NBI3 349 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PNPOQ9NVS9 261 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 FZD1Q9UP38 647 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 WDR64B1ANS9 1081 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CFLARO15519 480 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PEX1O43933 1283 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 RAG1P15918 1043 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CDK7P50613 346 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ARHGEF16Q5VV41 709 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 DEFB107AQ8IZN7 70 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 MPP5Q8N3R9 675 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 WDTC1Q8N5D0 677 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ADAM32Q8TC27 787 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ZFAND2BQ8WV99 257 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 MAGEB5Q9BZ81 275 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 FOXP3Q9BZS1 431 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 DMAP1Q9NPF5 467 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 GOLGA8QA0A0J9YX86 632 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 GOLGA8OA6NCC3 632 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 GOLGA8NF8WBI6 632 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 K7ERI5 159 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 MCF2LO15068 1137 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CSH1P0DML2 217 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CSH2P0DML3 217 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 PGGT1BP53609 377 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CDH6P55285 790 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 STX3Q13277 289 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CES3Q6UWW8 571 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CERKQ8TCT0 537 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms